Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265215
Identifier: 124265215
GI number: 124265215
Start: 24138
End: 24500
Strand: Reverse
Name: 124265215
Synonym: Mpe_A0022
Alternate gene names: NA
Gene position: 24500-24138 (Counterclockwise)
Preceding gene: 124265216
Following gene: 124265214
Centisome position: 0.61
GC content: 71.07
Gene sequence:
>363_bases ATGTCCTACATGCTGCTGATCGTCGAACCGACCGGCCAGCGCCGCGAGCGCGGTGTCGAGGCCGGCAAGGAAGCCTATGA ACGCATGCTGCAGTTCGGCGCCGGGCTGCAGGCGCGCGGGGTGCTGGAAGGCAGCAACTCGCTGGCCTCCACCCGCGAGG CCGTGCGGCTGCAGGTGCGTGACGGCCGCCCTCAGCTCATCGACGGCCCGTTCGCCGAGGCCAAGGAAATGGTCGGCGGC TACTTCCTGCTGAACGTGGCCACGCGCGACGAGGCGCTGGCGATCGCCGCCGCCTGCCCGGCGGCCGAGTGGTGCACGGT GGAGGTGCGGCAGGTCGGGCCGTGCTTCGAGTCGGCGATCTGA
Upstream 100 bases:
>100_bases GGCACGCTGACGGTCGGGCTTTTCCCGGCCGACGCAGAATCGGCTCCGGGTCACGCCGTCGCACCCCCTCGGGCGCGCGA GCCGGTGACCGGGAGCCGAG
Downstream 100 bases:
>100_bases ACCCTCACCCGCGCCCTTTCACCCGTTTCAGCAAATCCCGCCGCGGCCGCTGTCGATCCGGCCCGTCGTCGTTCGTCGTA CCCCCGAGAGCCCGCGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; DGPF Domain-Containing Protein; DGPF Domain-Containing
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSYMLLIVEPTGQRRERGVEAGKEAYERMLQFGAGLQARGVLEGSNSLASTREAVRLQVRDGRPQLIDGPFAEAKEMVGG YFLLNVATRDEALAIAAACPAAEWCTVEVRQVGPCFESAI
Sequences:
>Translated_120_residues MSYMLLIVEPTGQRRERGVEAGKEAYERMLQFGAGLQARGVLEGSNSLASTREAVRLQVRDGRPQLIDGPFAEAKEMVGG YFLLNVATRDEALAIAAACPAAEWCTVEVRQVGPCFESAI >Mature_119_residues SYMLLIVEPTGQRRERGVEAGKEAYERMLQFGAGLQARGVLEGSNSLASTREAVRLQVRDGRPQLIDGPFAEAKEMVGGY FLLNVATRDEALAIAAACPAAEWCTVEVRQVGPCFESAI
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13019; Mature: 12888
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYMLLIVEPTGQRRERGVEAGKEAYERMLQFGAGLQARGVLEGSNSLASTREAVRLQVR CCEEEEEECCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHEEEEEC DGRPQLIDGPFAEAKEMVGGYFLLNVATRDEALAIAAACPAAEWCTVEVRQVGPCFESAI CCCCCEECCCHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCEEEEHHHCCCHHHHCC >Mature Secondary Structure SYMLLIVEPTGQRRERGVEAGKEAYERMLQFGAGLQARGVLEGSNSLASTREAVRLQVR CEEEEEECCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHEEEEEC DGRPQLIDGPFAEAKEMVGGYFLLNVATRDEALAIAAACPAAEWCTVEVRQVGPCFESAI CCCCCEECCCHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCEEEEHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA