Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265214
Identifier: 124265214
GI number: 124265214
Start: 23594
End: 24007
Strand: Reverse
Name: 124265214
Synonym: Mpe_A0021
Alternate gene names: NA
Gene position: 24007-23594 (Counterclockwise)
Preceding gene: 124265215
Following gene: 124265213
Centisome position: 0.59
GC content: 72.71
Gene sequence:
>414_bases ATGCGATTCATGATCATGGTGAAGGCCACGTCCGACACCGAGGCGGGCGTGATGCCCGACGACAGCCTGATGGCCGCGAT GGTGGCCTACCACGAGGCGCTGGCGCAGGCCGGCGTGCTGCTCGACGCCGCCGGCCTGCAGCCCAGCCGCGCCGGATGGC GCATCCGCTACGCCGGCGGCCGGCGCACGGTGACCGACGGACCGTTCGCCGAGAGCAAGGAGCTGATCGCCGGCTACACG CTGATCCAGACCCGTTCGCGCGAGGAGGCGATGGAGTGGGCGCGCCGCTTCCCGGCGCCGATGGGCGCGCTGGCCGATGG CGAGGTGGAGGTGCGGCAGCTCTACGAGCTCGACGAGCTCCCGCCCGGCGCAGCGCTGGAGCGCTTCCGCGAACTGCAGG CGCCGCAGGGCTGA
Upstream 100 bases:
>100_bases GCAAATCCCGCCGCGGCCGCTGTCGATCCGGCCCGTCGTCGTTCGTCGTACCCCCGAGAGCCCGCGAAAGGCGCTCACCG TCACGACCGGGAGAACTGCG
Downstream 100 bases:
>100_bases GGCGCCTTCTCTCCGACCGATCTCCCGAAAGGACTCGCCATGCACTCACAGATCTTCGTCAACCTGCCCGTCAAGGACCT GCCGCGCTCGATGGCCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; DGPF Domain-Containing Protein; YCII-Like Protein; YCII-Related; Dgpfaetke; DGPFAETKE Domain-Containing Protein; DGPF Protein; DGPF Domain-Containing; Dgpfaetke Family Protein; Histidine Kinase; DGPF Domain Family; DGPF Domain Protein; Dgpfaetke-Domain Containing Protein; Dgpfaetke Domain; Dgpf Family Protein; Transcription Regulation Protein; Dgpfaetke Domain-Containing Protein; Glutathione S-Transferase
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRFMIMVKATSDTEAGVMPDDSLMAAMVAYHEALAQAGVLLDAAGLQPSRAGWRIRYAGGRRTVTDGPFAESKELIAGYT LIQTRSREEAMEWARRFPAPMGALADGEVEVRQLYELDELPPGAALERFRELQAPQG
Sequences:
>Translated_137_residues MRFMIMVKATSDTEAGVMPDDSLMAAMVAYHEALAQAGVLLDAAGLQPSRAGWRIRYAGGRRTVTDGPFAESKELIAGYT LIQTRSREEAMEWARRFPAPMGALADGEVEVRQLYELDELPPGAALERFRELQAPQG >Mature_137_residues MRFMIMVKATSDTEAGVMPDDSLMAAMVAYHEALAQAGVLLDAAGLQPSRAGWRIRYAGGRRTVTDGPFAESKELIAGYT LIQTRSREEAMEWARRFPAPMGALADGEVEVRQLYELDELPPGAALERFRELQAPQG
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15043; Mature: 15043
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFMIMVKATSDTEAGVMPDDSLMAAMVAYHEALAQAGVLLDAAGLQPSRAGWRIRYAGG CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCC RRTVTDGPFAESKELIAGYTLIQTRSREEAMEWARRFPAPMGALADGEVEVRQLYELDEL CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC PPGAALERFRELQAPQG CCCHHHHHHHHHCCCCC >Mature Secondary Structure MRFMIMVKATSDTEAGVMPDDSLMAAMVAYHEALAQAGVLLDAAGLQPSRAGWRIRYAGG CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCC RRTVTDGPFAESKELIAGYTLIQTRSREEAMEWARRFPAPMGALADGEVEVRQLYELDEL CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC PPGAALERFRELQAPQG CCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA