Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022397
Identifier: 124022397
GI number: 124022397
Start: 642824
End: 643336
Strand: Direct
Name: 124022397
Synonym: P9303_06881
Alternate gene names: NA
Gene position: 642824-643336 (Clockwise)
Preceding gene: 124022396
Following gene: 124022399
Centisome position: 23.96
GC content: 53.02
Gene sequence:
>513_bases TTGAGTCAGTCTCTGGATCTCCCTGACCTTGATCGGGTCGATACCCTTGCCCAAGAGCTGGCCCTCTTGCAGGACAAGGG CAAGCGCCGCATTGCCATGCTCGGCAGTCGCCATGTGCCGGTGGTAGCGATTCATCTTGTTGAATTGATGGCGCGCTCCC TTGCTCAAGAGGGTCATTCTCTGATCACCTCCGGTTCACAGGGGGTGAATGCCGCGGTGATCCGTGGGGTATTGGAGGCG GATGCCTCTTGCCTCACTGTGTTGCTTCCTCAGAGCCTTGATCGTCAGGCCCCTGAGATTCGCGATCAGCTTGACTCTGT GCTTCATCTCATCGAAAAACCTGAGCACGATGAGCTGTCGTTACCGATGGCTAGCAGTCTTTGCAATCAGGAGATCATCA GTCGTTGTGATCAATTGATCTGCTTTGCTTTCCATGACAGTGAGACGTTATTGACCAGTTGTCGCAGTGCTGAGGATATG GGCAAGGTTGTGAGTCTTTTGTTCTTTGATTGA
Upstream 100 bases:
>100_bases GAAGAACACTGTGACTTGGACCGTTTGTTTGATGTTCTGGGGTTGCCTATGCAGGGTCGATGACCACTGCTAGCTTCGAT CCATCGTCATGGGGATGTCC
Downstream 100 bases:
>100_bases GTTCAGCGACGCGGCAGTGGCAGAACCTGTAGTTGTGTGCCTTCACGGCCCATCACTACGACCTGATCACCGGCGTTTAT TGGAGTCTCCAGGTCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSQSLDLPDLDRVDTLAQELALLQDKGKRRIAMLGSRHVPVVAIHLVELMARSLAQEGHSLITSGSQGVNAAVIRGVLEA DASCLTVLLPQSLDRQAPEIRDQLDSVLHLIEKPEHDELSLPMASSLCNQEIISRCDQLICFAFHDSETLLTSCRSAEDM GKVVSLLFFD
Sequences:
>Translated_170_residues MSQSLDLPDLDRVDTLAQELALLQDKGKRRIAMLGSRHVPVVAIHLVELMARSLAQEGHSLITSGSQGVNAAVIRGVLEA DASCLTVLLPQSLDRQAPEIRDQLDSVLHLIEKPEHDELSLPMASSLCNQEIISRCDQLICFAFHDSETLLTSCRSAEDM GKVVSLLFFD >Mature_169_residues SQSLDLPDLDRVDTLAQELALLQDKGKRRIAMLGSRHVPVVAIHLVELMARSLAQEGHSLITSGSQGVNAAVIRGVLEAD ASCLTVLLPQSLDRQAPEIRDQLDSVLHLIEKPEHDELSLPMASSLCNQEIISRCDQLICFAFHDSETLLTSCRSAEDMG KVVSLLFFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18644; Mature: 18512
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLDLPDLDRVDTLAQELALLQDKGKRRIAMLGSRHVPVVAIHLVELMARSLAQEGHS CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LITSGSQGVNAAVIRGVLEADASCLTVLLPQSLDRQAPEIRDQLDSVLHLIEKPEHDELS HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC LPMASSLCNQEIISRCDQLICFAFHDSETLLTSCRSAEDMGKVVSLLFFD CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure SQSLDLPDLDRVDTLAQELALLQDKGKRRIAMLGSRHVPVVAIHLVELMARSLAQEGHS CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LITSGSQGVNAAVIRGVLEADASCLTVLLPQSLDRQAPEIRDQLDSVLHLIEKPEHDELS HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC LPMASSLCNQEIISRCDQLICFAFHDSETLLTSCRSAEDMGKVVSLLFFD CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA