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The map label for this gene is ybbK [C]

Identifier: 124022399

GI number: 124022399

Start: 643895

End: 644809

Strand: Direct

Name: ybbK [C]

Synonym: P9303_06901

Alternate gene names: 124022399

Gene position: 643895-644809 (Clockwise)

Preceding gene: 124022397

Following gene: 124022401

Centisome position: 24.0

GC content: 54.21

Gene sequence:

>915_bases
GTGGAAGCGTTTCTTGGTTTGCCAGCTCTCTTGCTAGTTGCCTTGTTGGGAAGTGGCACTGTCAAAATTACGAGTGGTGG
ACGCTCGCGCTTGGTTGAGCGGCTCGGCAAGTTCGATCGTGAACTGCAGCCTGGCCTTTCTTTTGTTCTCCCCATGGTTG
AAAAGGTGGTCAGTTACGAGTCGTTGAAGGAGAGAGTTTTGGATATTCCTCCTCAGCAATGCATCACTCGTGACAACGTG
TCGATCGAGGTGGATGCGGTGGTGTATTGGCAGCTACTTGAACACTCTCGTGCTTATTACTCGGTGGATAATCTGCAGGC
GGCGATGGTGAATCTCGTTCTCACTCAGATCCGAGCCGAGATGGGCAAGCTTGACCTTGACCAGACATTTACCACCCGTA
CAGAAGTGAACGAATGCCTTCTTAAGGAGTTGGATGAGGCCACAGATCCCTGGGGGGTCAAAGTCACGCGAGTGGAAATG
CGAGACATTGTTCCATCGCGAGGGGTGCAGCAAGCGATGGAACAGCAGATGACAGCAGAGCGGGAAAAACGTGCTGCCAT
CCTTCGTTCCGAGGGCGAGAAAGAGGCTCAGCTCAATGAGGCTCGTGGTCAGGCTGAAGCCTTGGTATTAGATGCTCGTG
CCCAGCAGGAAGCCCTGTTACTAGAAGCTGACGCCCAGGCAAAGCAGCAGTCAACCCTTGCTCGCGCCAAGGCGGAAGCC
GCCCTGGAGATTGCTCGGGCTTTGGAGGCCAGCCCCAGAGCGGAGGAGGCTTTGAGGCTTTTGTTGGCTAAAGAATGGAT
GGCTATGGGCGAGCAGATGGCGGCTGCACCAGCAGGAAGTGTCTTGATGGTTGATCCTCAAAGCCCAGCTGCTTTGCTTT
CGGCACTCAAGGCTTTTCAGAAATCAGATAGCTGA

Upstream 100 bases:

>100_bases
AGGGCTTTCTCTATCTACTTTGGAGAAGAGAAAGCTGTTTGGAAGGGCTTTGCCGTGGTTCGTTTACGGACCTAGGGTTT
GCTTACACAGGAAGAACATT

Downstream 100 bases:

>100_bases
GTTTGGGATGGCTGTTAGCTAGCTGGTTTAGCTCTCAAGAACTCGGCTAGGTCAGGGTTATTGGTCATGCGCTTCAAAGG
GTTGTGTTTTGTGAGTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MEAFLGLPALLLVALLGSGTVKITSGGRSRLVERLGKFDRELQPGLSFVLPMVEKVVSYESLKERVLDIPPQQCITRDNV
SIEVDAVVYWQLLEHSRAYYSVDNLQAAMVNLVLTQIRAEMGKLDLDQTFTTRTEVNECLLKELDEATDPWGVKVTRVEM
RDIVPSRGVQQAMEQQMTAEREKRAAILRSEGEKEAQLNEARGQAEALVLDARAQQEALLLEADAQAKQQSTLARAKAEA
ALEIARALEASPRAEEALRLLLAKEWMAMGEQMAAAPAGSVLMVDPQSPAALLSALKAFQKSDS

Sequences:

>Translated_304_residues
MEAFLGLPALLLVALLGSGTVKITSGGRSRLVERLGKFDRELQPGLSFVLPMVEKVVSYESLKERVLDIPPQQCITRDNV
SIEVDAVVYWQLLEHSRAYYSVDNLQAAMVNLVLTQIRAEMGKLDLDQTFTTRTEVNECLLKELDEATDPWGVKVTRVEM
RDIVPSRGVQQAMEQQMTAEREKRAAILRSEGEKEAQLNEARGQAEALVLDARAQQEALLLEADAQAKQQSTLARAKAEA
ALEIARALEASPRAEEALRLLLAKEWMAMGEQMAAAPAGSVLMVDPQSPAALLSALKAFQKSDS
>Mature_304_residues
MEAFLGLPALLLVALLGSGTVKITSGGRSRLVERLGKFDRELQPGLSFVLPMVEKVVSYESLKERVLDIPPQQCITRDNV
SIEVDAVVYWQLLEHSRAYYSVDNLQAAMVNLVLTQIRAEMGKLDLDQTFTTRTEVNECLLKELDEATDPWGVKVTRVEM
RDIVPSRGVQQAMEQQMTAEREKRAAILRSEGEKEAQLNEARGQAEALVLDARAQQEALLLEADAQAKQQSTLARAKAEA
ALEIARALEASPRAEEALRLLLAKEWMAMGEQMAAAPAGSVLMVDPQSPAALLSALKAFQKSDS

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=187, Percent_Identity=38.5026737967914, Blast_Score=158, Evalue=7e-39,
Organism=Homo sapiens, GI38016911, Length=192, Percent_Identity=34.8958333333333, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI221316744, Length=168, Percent_Identity=35.7142857142857, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI21686995, Length=168, Percent_Identity=35.7142857142857, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI7657615, Length=171, Percent_Identity=25.7309941520468, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1786697, Length=295, Percent_Identity=35.2542372881356, Blast_Score=197, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI32564147, Length=268, Percent_Identity=36.1940298507463, Blast_Score=164, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=31.25, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71989948, Length=180, Percent_Identity=34.4444444444444, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17569499, Length=173, Percent_Identity=35.2601156069364, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=180, Percent_Identity=34.4444444444444, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71987612, Length=158, Percent_Identity=36.7088607594937, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25153583, Length=158, Percent_Identity=36.7088607594937, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71987621, Length=158, Percent_Identity=36.7088607594937, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17569497, Length=182, Percent_Identity=31.3186813186813, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32566490, Length=153, Percent_Identity=33.9869281045752, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193210507, Length=173, Percent_Identity=33.5260115606936, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570161, Length=197, Percent_Identity=33.502538071066, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570459, Length=158, Percent_Identity=36.7088607594937, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45550506, Length=257, Percent_Identity=35.0194552529183, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI45556022, Length=153, Percent_Identity=37.2549019607843, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI281365664, Length=153, Percent_Identity=35.9477124183007, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24657857, Length=153, Percent_Identity=35.9477124183007, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI62484448, Length=153, Percent_Identity=35.9477124183007, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI62484274, Length=153, Percent_Identity=35.9477124183007, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI18860517, Length=167, Percent_Identity=32.3353293413174, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21356845, Length=166, Percent_Identity=28.3132530120482, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI281361631, Length=167, Percent_Identity=29.3413173652695, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI281361633, Length=167, Percent_Identity=29.3413173652695, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28573263, Length=194, Percent_Identity=26.2886597938144, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33443; Mature: 33443

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFLGLPALLLVALLGSGTVKITSGGRSRLVERLGKFDRELQPGLSFVLPMVEKVVSYE
CCCHHCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKERVLDIPPQQCITRDNVSIEVDAVVYWQLLEHSRAYYSVDNLQAAMVNLVLTQIRAE
HHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGKLDLDQTFTTRTEVNECLLKELDEATDPWGVKVTRVEMRDIVPSRGVQQAMEQQMTAE
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHH
REKRAAILRSEGEKEAQLNEARGQAEALVLDARAQQEALLLEADAQAKQQSTLARAKAEA
HHHHHHHHHCCCCHHHHHHHHCCHHHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALEIARALEASPRAEEALRLLLAKEWMAMGEQMAAAPAGSVLMVDPQSPAALLSALKAFQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
KSDS
CCCC
>Mature Secondary Structure
MEAFLGLPALLLVALLGSGTVKITSGGRSRLVERLGKFDRELQPGLSFVLPMVEKVVSYE
CCCHHCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKERVLDIPPQQCITRDNVSIEVDAVVYWQLLEHSRAYYSVDNLQAAMVNLVLTQIRAE
HHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGKLDLDQTFTTRTEVNECLLKELDEATDPWGVKVTRVEMRDIVPSRGVQQAMEQQMTAE
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHH
REKRAAILRSEGEKEAQLNEARGQAEALVLDARAQQEALLLEADAQAKQQSTLARAKAEA
HHHHHHHHHCCCCHHHHHHHHCCHHHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALEIARALEASPRAEEALRLLLAKEWMAMGEQMAAAPAGSVLMVDPQSPAALLSALKAFQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
KSDS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]