Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022385
Identifier: 124022385
GI number: 124022385
Start: 634331
End: 634978
Strand: Direct
Name: 124022385
Synonym: P9303_06761
Alternate gene names: NA
Gene position: 634331-634978 (Clockwise)
Preceding gene: 124022384
Following gene: 124022386
Centisome position: 23.65
GC content: 56.48
Gene sequence:
>648_bases GTGCTGTCAATCCCTTCGGCGACGGCAAGGCCAGCGGTCGCATTCTTGAGGCAAGTTGTGCATTCCTGGGCGTCTGAGGC TGCCTTTAGTTCTTGCGGTCACTACCGCTGGTGGTTGAAGCGCAGCCTTGGGCAATGCGAGCGCACGTTGCTTTTCATTG GCTTGAATCCCTCCACGGCTACAGCGTCAGAGGATGATCCAACCTTGCGGCGGTTGCTGGGGTTTTGCCGCTCCTGGGGT TATGGACACCTTCTTGTTGTGAATCTATTTGCGCGGATCAGTCAATCCCCAGCGCTGCTTAGGCACTGTGCTGATCCGAT TGGTGATGGAAATGATGATCAGCTTTTGACTCGGGCACGCCAGTGGTCTGAGAGCCCTAATTGGGACCTTTGGTTTGGTT GGGGGTGCGGTGGAGCTTGGCGTCGACGTGATCTTGCCGTCCAGGCTTTGTTGGAGCGTCATCGCCAGAACCGCATCAGG AACATTCCTGATGCTCGCGGCCCTCTCTCGCTTGGTTTGACACGTGAGGGGCAACCCTGCCATCCCCTTTACATGCCTGG CAAAGAGGTCCTTCGACCATTCAATTGGGCAAGTGGGGCAACTATCGGCCATCCTGAGTCGATGGACCTTGGCATTACGG TTCACTGA
Upstream 100 bases:
>100_bases GAAGCGGGTACGGCCAAGCTGGTTGGTACCGATCCGGAGATGATCGTGACTGAGACAGCTTCCTTGCTTGATGATTCAAG CGCCTACGAGGCGATGGCAC
Downstream 100 bases:
>100_bases TGACACGCACCCCACGCCGCTATGCGGTGTACCTCCATCTCTCCGGGGGGCAGACCGAAGAGGTTCATTTTCCTACTCTT GAGACGTTTCAGCAGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLSIPSATARPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLLVVNLFARISQSPALLRHCADPIGDGNDDQLLTRARQWSESPNWDLWFGWGCGGAWRRRDLAVQALLERHRQNRIR NIPDARGPLSLGLTREGQPCHPLYMPGKEVLRPFNWASGATIGHPESMDLGITVH
Sequences:
>Translated_215_residues MLSIPSATARPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLLVVNLFARISQSPALLRHCADPIGDGNDDQLLTRARQWSESPNWDLWFGWGCGGAWRRRDLAVQALLERHRQNRIR NIPDARGPLSLGLTREGQPCHPLYMPGKEVLRPFNWASGATIGHPESMDLGITVH >Mature_215_residues MLSIPSATARPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLLVVNLFARISQSPALLRHCADPIGDGNDDQLLTRARQWSESPNWDLWFGWGCGGAWRRRDLAVQALLERHRQNRIR NIPDARGPLSLGLTREGQPCHPLYMPGKEVLRPFNWASGATIGHPESMDLGITVH
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24148; Mature: 24148
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIPSATARPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC TASEDDPTLRRLLGFCRSWGYGHLLVVNLFARISQSPALLRHCADPIGDGNDDQLLTRAR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH QWSESPNWDLWFGWGCGGAWRRRDLAVQALLERHRQNRIRNIPDARGPLSLGLTREGQPC HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC HPLYMPGKEVLRPFNWASGATIGHPESMDLGITVH CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEC >Mature Secondary Structure MLSIPSATARPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC TASEDDPTLRRLLGFCRSWGYGHLLVVNLFARISQSPALLRHCADPIGDGNDDQLLTRAR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH QWSESPNWDLWFGWGCGGAWRRRDLAVQALLERHRQNRIRNIPDARGPLSLGLTREGQPC HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC HPLYMPGKEVLRPFNWASGATIGHPESMDLGITVH CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA