Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022357
Identifier: 124022357
GI number: 124022357
Start: 610131
End: 610985
Strand: Direct
Name: 124022357
Synonym: P9303_06471
Alternate gene names: NA
Gene position: 610131-610985 (Clockwise)
Preceding gene: 124022356
Following gene: 124022359
Centisome position: 22.74
GC content: 52.87
Gene sequence:
>855_bases ATGACTAGCCCTGTTGCCGCTGTTACTACCCGTGCTGCAGAGCAGGGGCCATTGGTTGATCTTGTGCAGGAAACTTTGGC CCTCACGCGCAGACTTTTCTTGCAGCTGTTGCGACGCCCGTCGACCTTGATTGCTGGCATCCTTCAGCCCTTGATCTGGT TGGTGTTGTTTGGTGCTTTGTTCTCTAATGCTCCGGAGGGTTTGTTGCCAGGAGGCATGAGCTACGGGAGGTTCTTAGGG GCTGGTGTGATTGTGTTCACCGCGTTCAGTGGTGCACTCAATGCTGGATTGCCAGTGATGTTTGATCGTGAATTTGGTTT TTTAAACCGTCTTCTGGTGGCTCCGCTGCGCAGTCGCAGCTCGATCGTGCTTGCTTCTGTGATCTACATCACATCTCTAA GTCTTCTGCAGAGCCTGGCGATCATGGCAACGGCTGCCTTGCTGGGTTACGGCTGGCCAGGTGTTTCGGGACTGGTCTTG GTGTTGTTCACCTTGTTGTTGCTGGTTTTTGCGTTCACTGCCTTGAGCCTTGGACTGGCTTTTGCTCTGCCAGGTCACAT TGAATTGATTGCGGTGATCTTTGTGGCCAATTTGCCTTTGTTGTTTGCGAGCACGGCTCTGGCGCCGCTTTCTTTTATGC CTGATTGGCTTGGTTGGCTTGCGGCCCTAAACCCTCTTACTTTTGCGATTGAGCCCATACGAGCTGCCTATGCCGGCCCG CTTGATCTTGGTGCCGTTCTGCTTGATGCTCCTTACGGCACTGTGAGTGGTTATGGATGTTTGACCGTGTTGATGGTGGT CACCGTTGGCTTGTTCCTGATGATTCGTCCTTTGTTGAACCGTAAACTCGCCTGA
Upstream 100 bases:
>100_bases GAGCGCAAAAAAGCGATGCGTTGATCCCTTTCGTTCGTTTTATTGAGTTGGATCTGCCTTAATCCACCCTTTTCTCATTC GTTCTGTTGTCAGTCACTCC
Downstream 100 bases:
>100_bases TTTCGTGCACCACTCCACTGCTTGCCATGCCTGACGTCCAGCAGGTGTATCGCTATTGCGTCACGACATTGCTGAGCCTT TGGCAGATGCAATGGTTCTT
Product: multidrug efflux ABC transporter
Products: NA
Alternate protein names: Multidrug Efflux ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; Multidrug ABC Transporter Permease Protein; ABC Transporter Permease Protein; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; ABC-Type Multidrug Transport System ATPase Component; Multidrug ABC Transporter; ABC Transporter; Drug Exporter ABC Transporter Permease; ABC Type Transporter Permease Component; Multidrug ABC Transporter Permease Component; ABC-2 Type Tranporter; ABC Transporter Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTSPVAAVTTRAAEQGPLVDLVQETLALTRRLFLQLLRRPSTLIAGILQPLIWLVLFGALFSNAPEGLLPGGMSYGRFLG AGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLRSRSSIVLASVIYITSLSLLQSLAIMATAALLGYGWPGVSGLVL VLFTLLLLVFAFTALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPLSFMPDWLGWLAALNPLTFAIEPIRAAYAGP LDLGAVLLDAPYGTVSGYGCLTVLMVVTVGLFLMIRPLLNRKLA
Sequences:
>Translated_284_residues MTSPVAAVTTRAAEQGPLVDLVQETLALTRRLFLQLLRRPSTLIAGILQPLIWLVLFGALFSNAPEGLLPGGMSYGRFLG AGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLRSRSSIVLASVIYITSLSLLQSLAIMATAALLGYGWPGVSGLVL VLFTLLLLVFAFTALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPLSFMPDWLGWLAALNPLTFAIEPIRAAYAGP LDLGAVLLDAPYGTVSGYGCLTVLMVVTVGLFLMIRPLLNRKLA >Mature_283_residues TSPVAAVTTRAAEQGPLVDLVQETLALTRRLFLQLLRRPSTLIAGILQPLIWLVLFGALFSNAPEGLLPGGMSYGRFLGA GVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLRSRSSIVLASVIYITSLSLLQSLAIMATAALLGYGWPGVSGLVLV LFTLLLLVFAFTALSLGLAFALPGHIELIAVIFVANLPLLFASTALAPLSFMPDWLGWLAALNPLTFAIEPIRAAYAGPL DLGAVLLDAPYGTVSGYGCLTVLMVVTVGLFLMIRPLLNRKLA
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30096; Mature: 29964
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPVAAVTTRAAEQGPLVDLVQETLALTRRLFLQLLRRPSTLIAGILQPLIWLVLFGAL CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FSNAPEGLLPGGMSYGRFLGAGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLRSRS HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCC SIVLASVIYITSLSLLQSLAIMATAALLGYGWPGVSGLVLVLFTLLLLVFAFTALSLGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FALPGHIELIAVIFVANLPLLFASTALAPLSFMPDWLGWLAALNPLTFAIEPIRAAYAGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHCCC LDLGAVLLDAPYGTVSGYGCLTVLMVVTVGLFLMIRPLLNRKLA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSPVAAVTTRAAEQGPLVDLVQETLALTRRLFLQLLRRPSTLIAGILQPLIWLVLFGAL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FSNAPEGLLPGGMSYGRFLGAGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLRSRS HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCC SIVLASVIYITSLSLLQSLAIMATAALLGYGWPGVSGLVLVLFTLLLLVFAFTALSLGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FALPGHIELIAVIFVANLPLLFASTALAPLSFMPDWLGWLAALNPLTFAIEPIRAAYAGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHCCC LDLGAVLLDAPYGTVSGYGCLTVLMVVTVGLFLMIRPLLNRKLA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA