Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is nanE [H]
Identifier: 124022359
GI number: 124022359
Start: 611260
End: 611952
Strand: Direct
Name: nanE [H]
Synonym: P9303_06491
Alternate gene names: 124022359
Gene position: 611260-611952 (Clockwise)
Preceding gene: 124022357
Following gene: 124022361
Centisome position: 22.79
GC content: 54.98
Gene sequence:
>693_bases ATGTCTTTGCCTGCTTTTGAAACTCTCAGACGGGGGTTGATTGTCTCTGTTCAGGCGCCCGAGGGTTCACCGATGCGTCA TCCTCAGGTGATTGCGGCCATGGCTGAAGCCAGTCTTTGCAATGGCGCGGTTGGGGTGCGTTTGGAAAGTCCGGAACACA TTGGTGCCGTTCGACGCCGTTGTCCGGATGCCTTGATTATTGGGCTTTGGAAGCGTTCCTTCCCTGATAGTGCTGTCTAC ATCACGCCAGGATGGGAGGAGGTTCAGGCTGTCTGGTCGGCGGGAGCAGATGTCGTGGCTCTCGATGCTACCCAGCGTCA TCGGCCAGGGGGGATCACTCTTGAGCAGCTTGTGAGTCGGGTTCGGGAAGAGTTGGGACCCCCTCTGATGGCAGATGTCG ATACGATTGAGAATGGTTTACTTGCAGCAGAGCTTGGTTGCAGCTTTGTGGGCACCACTCTTTATGGCTATACCGAAGTG ACTGCTGTTAAGCGGCCTCCGGGTTTGTGTTTGTTGGGGCCGTTGCGGCAGCAGCTTGATTCAGATGTCAAGCTCATCTG CGAAGGCGGGCTTGATTCTCCTCAGATAGCACTAGAAGCATTGTCTTCAGGTGCAGACATGGTGGTAGTCGGTACAGCGA TTACCGGTGTCGACCTGCAGGTGGAAAACTATTGCCGAACATTGGCGGCTTAA
Upstream 100 bases:
>100_bases ACTCGTTGTCAGTCCTACCTTCCCCTGCTTTTGCTCTAAACCATTTGCCGCATCATTGCTCGCCAATCACGAATGCAAAG CTGTCGAAGGCATCCTGAGC
Downstream 100 bases:
>100_bases CTTCCAAAGCTTTTTGGCATCAACCGAACTGTGGGACGTGCTTTGGGTCGTGACTTGTCCAGGCAGATGCAGATGCACAA CGCATGAGACTTGTCCATGC
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAEASLCNGAVGVRLESPEHIGAVRRRCPDALIIGLWKRSFPDSAVY ITPGWEEVQAVWSAGADVVALDATQRHRPGGITLEQLVSRVREELGPPLMADVDTIENGLLAAELGCSFVGTTLYGYTEV TAVKRPPGLCLLGPLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA
Sequences:
>Translated_230_residues MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAEASLCNGAVGVRLESPEHIGAVRRRCPDALIIGLWKRSFPDSAVY ITPGWEEVQAVWSAGADVVALDATQRHRPGGITLEQLVSRVREELGPPLMADVDTIENGLLAAELGCSFVGTTLYGYTEV TAVKRPPGLCLLGPLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA >Mature_229_residues SLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAEASLCNGAVGVRLESPEHIGAVRRRCPDALIIGLWKRSFPDSAVYI TPGWEEVQAVWSAGADVVALDATQRHRPGGITLEQLVSRVREELGPPLMADVDTIENGLLAAELGCSFVGTTLYGYTEVT AVKRPPGLCLLGPLRQQLDSDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=215, Percent_Identity=39.0697674418605, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 24413; Mature: 24282
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAEASLCNGAVGVRLESPEHIGAVRRR CCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH CPDALIIGLWKRSFPDSAVYITPGWEEVQAVWSAGADVVALDATQRHRPGGITLEQLVSR CCHHEEEHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHH VREELGPPLMADVDTIENGLLAAELGCSFVGTTLYGYTEVTAVKRPPGLCLLGPLRQQLD HHHHHCCCCEECHHHHHCCEEEHHHCCHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHCC SDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEHHHHHHHHCC >Mature Secondary Structure SLPAFETLRRGLIVSVQAPEGSPMRHPQVIAAMAEASLCNGAVGVRLESPEHIGAVRRR CCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH CPDALIIGLWKRSFPDSAVYITPGWEEVQAVWSAGADVVALDATQRHRPGGITLEQLVSR CCHHEEEHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHH VREELGPPLMADVDTIENGLLAAELGCSFVGTTLYGYTEVTAVKRPPGLCLLGPLRQQLD HHHHHCCCCEECHHHHHCCEEEHHHCCHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHCC SDVKLICEGGLDSPQIALEALSSGADMVVVGTAITGVDLQVENYCRTLAA CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA