Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022342
Identifier: 124022342
GI number: 124022342
Start: 597025
End: 597705
Strand: Direct
Name: 124022342
Synonym: P9303_06321
Alternate gene names: NA
Gene position: 597025-597705 (Clockwise)
Preceding gene: 124022341
Following gene: 124022343
Centisome position: 22.25
GC content: 55.95
Gene sequence:
>681_bases TTGATCTGGTTTGCTGGTTTGCGCAAGGGTTCGAGAGCTTCTCAACCCATAAGCCGTCGCCAGGCCCTGAGAATGATGGA GACTTCTTACCTTGCGGCTGCTTCAGCTCTGATCTGGGTGGCGCTCTATTACCTCCCTGTTGGTGGAGCCCTATTTCGGT TGGCGTTGCCGTTGCCTTTAGCCCTGCTGCATGTGCGTCGCGGTTCTAAGGCAGGGCTAGAGGGTGTTGCCCTGGCGGTG CTTTTGTTGATTGCCTTGATGGGGCCTGTTCGTGGTCCCTTGGTGCTGTTCCCTTATGGTCTTCTAGCGTTCTGGCTTGG CTGGAGTTGGCATCGTGGGCTGAGCTGGTGGGTGAGTTGGGGGTGTGGAGTTGTGATTGGAACAGCGGGTTTTCTGGTAC GGGTTGTGGTGCTGTCGCTTTTGGTGGGTGAGAACCTTTGGGTGGTGATCACCCGAGCAGGATCAGGTCTGCTTGATCGA TTGGTGGACTTGCTCAATCTGCCTCTGGCCCCAGATCTCAATCATGTGCAGCTGATGGCCTTTGCTTTGGTGGTTTTTCA AGAGTTGGTCTACGTGCTTGTTCTTCATGCGCTGGCCTTCTGGATTTTTCCTCGGCTGCAGGGACCAATTCCCGAGCCCC CCAGACTTCTGCATGGCCTCGTTGCCCTGGACCCCCTCTAA
Upstream 100 bases:
>100_bases CATTACGAATGGCTGGAGTGACTTTTGAGGTTGAGACGATTGAACGGGTCAAGGATCAGTCTTTGATCAGAGTGCCGCCT TCCGGTATGGGAGCGCAGCC
Downstream 100 bases:
>100_bases TCTCAAGCCGGGTTCGCCTCCTAGAGGTCTACCTTTAGGTTGTAAAGCCTTTGGTGCAGGTGCATCTCCAGCCGCGCAGG AGAGATGGTTAAGGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIWFAGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGLLAFWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNHVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGPIPEPPRLLHGLVALDPL
Sequences:
>Translated_226_residues MIWFAGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGLLAFWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNHVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGPIPEPPRLLHGLVALDPL >Mature_226_residues MIWFAGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGLLAFWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNHVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGPIPEPPRLLHGLVALDPL
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24817; Mature: 24817
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWFAGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPL CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLHVRRGSKAGLEGVALAVLLLIALMGPVRGPLVLFPYGLLAFWLGWSWHRGLSWWVSW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH GCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDRLVDLLNLPLAPDLNHVQLMA CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHH FALVVFQELVYVLVLHALAFWIFPRLQGPIPEPPRLLHGLVALDPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIWFAGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPL CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLHVRRGSKAGLEGVALAVLLLIALMGPVRGPLVLFPYGLLAFWLGWSWHRGLSWWVSW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH GCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDRLVDLLNLPLAPDLNHVQLMA CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHH FALVVFQELVYVLVLHALAFWIFPRLQGPIPEPPRLLHGLVALDPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA