Click here to switch to the map view.

The map label for this gene is cobT

Identifier: 124022343

GI number: 124022343

Start: 597611

End: 598888

Strand: Direct

Name: cobT

Synonym: P9303_06331

Alternate gene names: NA

Gene position: 597611-598888 (Clockwise)

Preceding gene: 124022342

Following gene: 124022344

Centisome position: 22.28

GC content: 58.14

Gene sequence:

>1278_bases
ATGCGCTGGCCTTCTGGATTTTTCCTCGGCTGCAGGGACCAATTCCCGAGCCCCCCAGACTTCTGCATGGCCTCGTTGCC
CTGGACCCCCTCTAATCTCAAGCCGGGTTCGCCTCCTAGAGGTCTACCTTTAGGTTGTAAAGCCTTTGGTGCAGGTGCAT
CTCCAGCCGCGCAGGAGAGATGGTTAAGGCCCTGGCGGGATGGGGGCCTGGGGTTCTCTTTACTGTTGGTGTTGGCTGGC
ACGCGTACTGCCGAGGTGGAGGGCATTTCGGCGGCAGGTGCTACCTCAGCTGCCCGTCGCTACACAGCTGTGGCAGATGC
GGAACTGCTGCTTAAGGGCCCTGATAGGCCAAGGCTGTGCTCGCTTCCACCTCTTCCAGCAGGGATCTCACCGGCCCTGA
TTAGTTATGTTGCCGCTCGTTGGATTGGCGTAGACCCATTGGTGGCGGCGGTTGGCTTAACCCTGTCGCCTCCATTCCCC
CATCTGCGCCTGGAGGCGCCGGGAATGGGTCCGGCTGCTTGTTTGAGTAGTGGGGAGGCAATGGGTCTGTCGCGTGTGCA
TGCTCTCTGGCAGCGTGGCTTTTGCCTTGGGCGAGGTCTTCGTCGTCCTTTGGTATTGGCCGAATGTGTCCCTGGAGGAA
CGACCACTGCTCAGGCTGTACTCACCGGGCTTGGCTTGCAGGTTGCTGATCTGATCAGTGGTAGTGCTCGTCAGCCACCA
ATGGTCTTGAAACAGGAGTTGGTTGATCGTGGCTTGAGCAAAGCGGCCTTGGGGTTTAACCCTCCACCTCAGCGAGTGAT
TGCGGCCGTAGGTGATCCTTTTCAGCCCGTAGCTGTTGGGCTGCTACTTGGTGCAAGAGAGGCTGGTCAGCCTGTCATGC
TTGGCGGTGGCAGTCAGATGGTGGCCGTGCTGGCTCTGGCCTTGGCAGCTATGGAACGATCCCATCGCCAGGACATGGTT
GATGGGATTGTGCTGGGTACCACGTCTTGGCTGGCAGAGGAGGCTAAGCGTTCAGATGGCAGGCCAGGTGCACTTGAGTG
TCTGATCGATTGCGTAGGGGAGTCTTTCGGTGTTCGCCTTTTGGGCTTGGCCACAGGGCTGCGTTTTCATAACAGTCAGC
ATCGGGCTCTTCAGGATTATGAGCTTGGATATGTCAAAGAAGGTGTTGGTGCTGGAGCCCTGGCGCTATTGGCTCAGCTT
CAAGGGGCTTCTTGTGAGCAGCTGTTGGAGGCGTGTGATCAAGCTATGAACCAATTGTTGGGGACGTCTTGCTCATGA

Upstream 100 bases:

>100_bases
GACTTGCTCAATCTGCCTCTGGCCCCAGATCTCAATCATGTGCAGCTGATGGCCTTTGCTTTGGTGGTTTTTCAAGAGTT
GGTCTACGTGCTTGTTCTTC

Downstream 100 bases:

>100_bases
GATTTTCTCCGCTTCGTAGGGTCTGATCGATGAGTGGCGCCATGCTTGAACAAAGGCAGCTTGGACGAAGAGAGCTGCTA
AAACTGGGCTTGATGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRWPSGFFLGCRDQFPSPPDFCMASLPWTPSNLKPGSPPRGLPLGCKAFGAGASPAAQERWLRPWRDGGLGFSLLLVLAG
TRTAEVEGISAAGATSAARRYTAVADAELLLKGPDRPRLCSLPPLPAGISPALISYVAARWIGVDPLVAAVGLTLSPPFP
HLRLEAPGMGPAACLSSGEAMGLSRVHALWQRGFCLGRGLRRPLVLAECVPGGTTTAQAVLTGLGLQVADLISGSARQPP
MVLKQELVDRGLSKAALGFNPPPQRVIAAVGDPFQPVAVGLLLGAREAGQPVMLGGGSQMVAVLALALAAMERSHRQDMV
DGIVLGTTSWLAEEAKRSDGRPGALECLIDCVGESFGVRLLGLATGLRFHNSQHRALQDYELGYVKEGVGAGALALLAQL
QGASCEQLLEACDQAMNQLLGTSCS

Sequences:

>Translated_425_residues
MRWPSGFFLGCRDQFPSPPDFCMASLPWTPSNLKPGSPPRGLPLGCKAFGAGASPAAQERWLRPWRDGGLGFSLLLVLAG
TRTAEVEGISAAGATSAARRYTAVADAELLLKGPDRPRLCSLPPLPAGISPALISYVAARWIGVDPLVAAVGLTLSPPFP
HLRLEAPGMGPAACLSSGEAMGLSRVHALWQRGFCLGRGLRRPLVLAECVPGGTTTAQAVLTGLGLQVADLISGSARQPP
MVLKQELVDRGLSKAALGFNPPPQRVIAAVGDPFQPVAVGLLLGAREAGQPVMLGGGSQMVAVLALALAAMERSHRQDMV
DGIVLGTTSWLAEEAKRSDGRPGALECLIDCVGESFGVRLLGLATGLRFHNSQHRALQDYELGYVKEGVGAGALALLAQL
QGASCEQLLEACDQAMNQLLGTSCS
>Mature_425_residues
MRWPSGFFLGCRDQFPSPPDFCMASLPWTPSNLKPGSPPRGLPLGCKAFGAGASPAAQERWLRPWRDGGLGFSLLLVLAG
TRTAEVEGISAAGATSAARRYTAVADAELLLKGPDRPRLCSLPPLPAGISPALISYVAARWIGVDPLVAAVGLTLSPPFP
HLRLEAPGMGPAACLSSGEAMGLSRVHALWQRGFCLGRGLRRPLVLAECVPGGTTTAQAVLTGLGLQVADLISGSARQPP
MVLKQELVDRGLSKAALGFNPPPQRVIAAVGDPFQPVAVGLLLGAREAGQPVMLGGGSQMVAVLALALAAMERSHRQDMV
DGIVLGTTSWLAEEAKRSDGRPGALECLIDCVGESFGVRLLGLATGLRFHNSQHRALQDYELGYVKEGVGAGALALLAQL
QGASCEQLLEACDQAMNQLLGTSCS

Specific function: Unknown

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0284 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR002805 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: NA

Molecular weight: Translated: 44255; Mature: 44255

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWPSGFFLGCRDQFPSPPDFCMASLPWTPSNLKPGSPPRGLPLGCKAFGAGASPAAQER
CCCCCCCEECCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHH
WLRPWRDGGLGFSLLLVLAGTRTAEVEGISAAGATSAARRYTAVADAELLLKGPDRPRLC
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCCCC
SLPPLPAGISPALISYVAARWIGVDPLVAAVGLTLSPPFPHLRLEAPGMGPAACLSSGEA
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHCCCCH
MGLSRVHALWQRGFCLGRGLRRPLVLAECVPGGTTTAQAVLTGLGLQVADLISGSARQPP
HHHHHHHHHHHCCHHHHHCCCCCEEHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCH
MVLKQELVDRGLSKAALGFNPPPQRVIAAVGDPFQPVAVGLLLGAREAGQPVMLGGGSQM
HHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHH
VAVLALALAAMERSHRQDMVDGIVLGTTSWLAEEAKRSDGRPGALECLIDCVGESFGVRL
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCEEH
LGLATGLRFHNSQHRALQDYELGYVKEGVGAGALALLAQLQGASCEQLLEACDQAMNQLL
HHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GTSCS
CCCCC
>Mature Secondary Structure
MRWPSGFFLGCRDQFPSPPDFCMASLPWTPSNLKPGSPPRGLPLGCKAFGAGASPAAQER
CCCCCCCEECCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHH
WLRPWRDGGLGFSLLLVLAGTRTAEVEGISAAGATSAARRYTAVADAELLLKGPDRPRLC
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCCCC
SLPPLPAGISPALISYVAARWIGVDPLVAAVGLTLSPPFPHLRLEAPGMGPAACLSSGEA
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHCCCCH
MGLSRVHALWQRGFCLGRGLRRPLVLAECVPGGTTTAQAVLTGLGLQVADLISGSARQPP
HHHHHHHHHHHCCHHHHHCCCCCEEHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCH
MVLKQELVDRGLSKAALGFNPPPQRVIAAVGDPFQPVAVGLLLGAREAGQPVMLGGGSQM
HHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHH
VAVLALALAAMERSHRQDMVDGIVLGTTSWLAEEAKRSDGRPGALECLIDCVGESFGVRL
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCEEH
LGLATGLRFHNSQHRALQDYELGYVKEGVGAGALALLAQLQGASCEQLLEACDQAMNQLL
HHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GTSCS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]