Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022300
Identifier: 124022300
GI number: 124022300
Start: 561634
End: 561966
Strand: Direct
Name: 124022300
Synonym: P9303_05901
Alternate gene names: NA
Gene position: 561634-561966 (Clockwise)
Preceding gene: 124022298
Following gene: 124022301
Centisome position: 20.94
GC content: 56.46
Gene sequence:
>333_bases ATGCCTCCAGTTCTTGGCAGTTTCGGCTCCCCTGTCATCGTCCTTACTGGGACTCTCGGTTGGCAGTTCTATTTGGTATG TGTCTTCGTGATCGTTGGCCTTATCCTCACTGGTTATATCTTGCCCTCTTCCGGGGTGTATGGCTCTCTGAGAGGTTGGG GCACAGGGACTCCATGGCTTGTCGGCATTGTGCTGCTGGCTAGCGTTGTGACGGTGGTAGAGGTGGCTCGCGGCCTGGTT GGCCCCTCCTTGGCTGTCGGCCTCTTTATGCTCATCCTTGGATTGCTCGTCCTGGACCAGTTGGGTCGGCAACTCTCTAG GTCTGGTGGTTGA
Upstream 100 bases:
>100_bases GGCAGGAATGGCGCCTGTTGTAATTTTTAGCGGAGTCCAGCTTCATTTTTTCTAAATGTGGTAAGGTTCGGCGTCTTCAA GTAAATGCTGCTAAAAAATT
Downstream 100 bases:
>100_bases TTTCTCGCCAATTTTCTTCTTGGTTGCTCGCATTAGCAGTTAGATCTAATTGATTGCCACTTTTCATTGGTACTGATTGG ATCAATCAATCTCTCAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPPVLGSFGSPVIVLTGTLGWQFYLVCVFVIVGLILTGYILPSSGVYGSLRGWGTGTPWLVGIVLLASVVTVVEVARGLV GPSLAVGLFMLILGLLVLDQLGRQLSRSGG
Sequences:
>Translated_110_residues MPPVLGSFGSPVIVLTGTLGWQFYLVCVFVIVGLILTGYILPSSGVYGSLRGWGTGTPWLVGIVLLASVVTVVEVARGLV GPSLAVGLFMLILGLLVLDQLGRQLSRSGG >Mature_109_residues PPVLGSFGSPVIVLTGTLGWQFYLVCVFVIVGLILTGYILPSSGVYGSLRGWGTGTPWLVGIVLLASVVTVVEVARGLVG PSLAVGLFMLILGLLVLDQLGRQLSRSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11384; Mature: 11253
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVLGSFGSPVIVLTGTLGWQFYLVCVFVIVGLILTGYILPSSGVYGSLRGWGTGTPWL CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH VGIVLLASVVTVVEVARGLVGPSLAVGLFMLILGLLVLDQLGRQLSRSGG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPVLGSFGSPVIVLTGTLGWQFYLVCVFVIVGLILTGYILPSSGVYGSLRGWGTGTPWL CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH VGIVLLASVVTVVEVARGLVGPSLAVGLFMLILGLLVLDQLGRQLSRSGG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA