Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022301
Identifier: 124022301
GI number: 124022301
Start: 562221
End: 562370
Strand: Direct
Name: 124022301
Synonym: P9303_05911
Alternate gene names: NA
Gene position: 562221-562370 (Clockwise)
Preceding gene: 124022300
Following gene: 124022306
Centisome position: 20.96
GC content: 46.67
Gene sequence:
>150_bases TTGGCTGGCTTAATACCAGTGGTGAGCTTGATCACATGGCTGTTTGCTCAGCATGCTTCTAGTGCTTTCACTGTCTTCAG GCTGATGTCATTTACACCTGGGGCTTTAATAGCAGGTGTGCTATCAGCACCAGATCAAACCAACCTTTAG
Upstream 100 bases:
>100_bases CTGGGCTTTTTTTATTGTTTCCCCCCTATAGCGGTGCCGACTTTTTGTTTTCGTGATCCTCCGCTTTTGACAGGTTCTTG CCTCTTCATCTGAGAGGCAC
Downstream 100 bases:
>100_bases GGATCACCAAGAGCATTCACATTCTTGGCCGTTCTGGTTAAGCAGGGTGGTATTGAGGTGGTCACACAAAGCAGTTTTTC TTCTTGCCATCGTCGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MAGLIPVVSLITWLFAQHASSAFTVFRLMSFTPGALIAGVLSAPDQTNL
Sequences:
>Translated_49_residues MAGLIPVVSLITWLFAQHASSAFTVFRLMSFTPGALIAGVLSAPDQTNL >Mature_48_residues AGLIPVVSLITWLFAQHASSAFTVFRLMSFTPGALIAGVLSAPDQTNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5162; Mature: 5031
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLIPVVSLITWLFAQHASSAFTVFRLMSFTPGALIAGVLSAPDQTNL CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure AGLIPVVSLITWLFAQHASSAFTVFRLMSFTPGALIAGVLSAPDQTNL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA