Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is gluQ
Identifier: 124022282
GI number: 124022282
Start: 551489
End: 552409
Strand: Direct
Name: gluQ
Synonym: P9303_05721
Alternate gene names: 124022282
Gene position: 551489-552409 (Clockwise)
Preceding gene: 124022281
Following gene: 124022283
Centisome position: 20.56
GC content: 57.0
Gene sequence:
>921_bases ATGGCCACGTCCTCTGAACTGCCTGATCATCTGTATGAGCAGATGGAAGCGGGGCAGCGCCTTAGGAATCAGGGCTATCG CGGCAGGTTTGCCCCGTCTCCGACGGGACCATTACACCTGGGCAATCTGTGCACTGCTCTGGTGTCTTGGTTGCAAGCGC GCTTGGCTAATGGGGCTTGGCTGTTGCGGGTGGATGACCTGGATCAGCCTCGCAATCGTGTGGGAGCGGTTGAGAGCCTG CAGCAGGATTTGCACTGGCTAGGCCTTGATTGGGATGGTCCCGTGGTGTTTCAGAGCCGCCGCCGTGGGCTTTACAACTC TTTCCTCTCCGCTCTGCGGCGCCAGGGGAAGTTGTATGCCTGTCGATGTAGCCGGCGAATGTTGGCTGACATCTCAGCAC CAGCTGGGCGGCACTTGGTTTACCCAGGCACGTGTCGAGATCTGGAGCTGTTTTGGGGGTGGCATGAGGGCAGGCTGCCC AGTTGGCGTTTAAGGGTGAGCAAAGAGTTCTCCCATACCAGTGGGGACGTGATTTTGCGGCGCGCTGATGGTTTTATCGC TTATCACTTGGCGACGGTTGTTGATGAACTGACTCTCGGGATTAGTGAGGTCGTACGCGGTGAAGACTTGCTTGTGGCCA TGAATGCACAGCTCGCTTTGATCAATGAGATTTCAGCGCGGCCTGTGATCTATCGCCACGTGCCGTTGTTGTGTGATGAC CAAGGCAGGAAGTTGGCCAAGCGAGAGGGACATGCTGGTTTGGACAGCCTGCGTTCCGAGGGACTGGGGCCTTCCCATGT GGTGGGCTGGCTTGCTGCTAGCCAGAGCCTTGTTCCTTTTGGTGCTGAACTCACGGCAGGGGAGTTGTTGAGTGAGTTGA AGAAGAAGGAGGGGGTTCTAAAAAGCGTGCTGAAGCCTTAA
Upstream 100 bases:
>100_bases GTTCAGGGCTGATTTTTTAGCCCTTGTTTGCAGACGGGCGGTCGTCACGGCCGCCTTTTATTTGTGGGCCTACTGAGTCA GGGCTCCTTCCATTGATTCA
Downstream 100 bases:
>100_bases AGGCGCAATGGCTCTAATTCTTAACGAAGCCTTCGGGATCGTAATCGCAAAAATGTATGAAAATAACTGGTCACTTAATG CACACAATCAATGTCGATCT
Product: glutamyl/glutaminyl-tRNA synthetase
Products: NA
Alternate protein names: Glu-Q-RSs
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MATSSELPDHLYEQMEAGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESL QQDLHWLGLDWDGPVVFQSRRRGLYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLP SWRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLVAMNAQLALINEISARPVIYRHVPLLCDD QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP
Sequences:
>Translated_306_residues MATSSELPDHLYEQMEAGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESL QQDLHWLGLDWDGPVVFQSRRRGLYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLP SWRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLVAMNAQLALINEISARPVIYRHVPLLCDD QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP >Mature_305_residues ATSSELPDHLYEQMEAGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESLQ QDLHWLGLDWDGPVVFQSRRRGLYNSFLSALRRQGKLYACRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPS WRLRVSKEFSHTSGDVILRRADGFIAYHLATVVDELTLGISEVVRGEDLLVAMNAQLALINEISARPVIYRHVPLLCDDQ GRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVLKSVLKP
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily
Homologues:
Organism=Homo sapiens, GI134288884, Length=296, Percent_Identity=33.445945945946, Blast_Score=139, Evalue=2e-33, Organism=Escherichia coli, GI226510925, Length=260, Percent_Identity=36.5384615384615, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1788743, Length=261, Percent_Identity=32.9501915708812, Blast_Score=146, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324540, Length=274, Percent_Identity=33.5766423357664, Blast_Score=141, Evalue=1e-34, Organism=Drosophila melanogaster, GI24665321, Length=278, Percent_Identity=34.1726618705036, Blast_Score=140, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLUQ_PROM3 (A2C764)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016589.1 - ProteinModelPortal: A2C764 - SMR: A2C764 - STRING: A2C764 - GeneID: 4778302 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_05721 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: DAPSSYH - ProtClustDB: PRK05710 - GO: GO:0005737 - HAMAP: MF_01428 - InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987
Pfam domain/function: PF00749 tRNA-synt_1c
EC number: NA
Molecular weight: Translated: 34071; Mature: 33939
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 65-65 BINDING 188-188 BINDING 206-206 BINDING 247-247
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSSELPDHLYEQMEAGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAW CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE LLRVDDLDQPRNRVGAVESLQQDLHWLGLDWDGPVVFQSRRRGLYNSFLSALRRQGKLYA EEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCEEE CRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPSWRLRVSKEFSHTSGDVILR EHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCEEEE RADGFIAYHLATVVDELTLGISEVVRGEDLLVAMNAQLALINEISARPVIYRHVPLLCDD ECCCHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCCEEEEHHHCCCCEEEECCCEEECC QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVL CCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KSVLKP HHHHCC >Mature Secondary Structure ATSSELPDHLYEQMEAGQRLRNQGYRGRFAPSPTGPLHLGNLCTALVSWLQARLANGAW CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE LLRVDDLDQPRNRVGAVESLQQDLHWLGLDWDGPVVFQSRRRGLYNSFLSALRRQGKLYA EEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCEEE CRCSRRMLADISAPAGRHLVYPGTCRDLELFWGWHEGRLPSWRLRVSKEFSHTSGDVILR EHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCEEEE RADGFIAYHLATVVDELTLGISEVVRGEDLLVAMNAQLALINEISARPVIYRHVPLLCDD ECCCHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCCEEEEHHHCCCCEEEECCCEEECC QGRKLAKREGHAGLDSLRSEGLGPSHVVGWLAASQSLVPFGAELTAGELLSELKKKEGVL CCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KSVLKP HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA