Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022283

Identifier: 124022283

GI number: 124022283

Start: 552500

End: 552697

Strand: Direct

Name: 124022283

Synonym: P9303_05731

Alternate gene names: NA

Gene position: 552500-552697 (Clockwise)

Preceding gene: 124022282

Following gene: 124022284

Centisome position: 20.6

GC content: 54.04

Gene sequence:

>198_bases
ATGTCGATCTGCCCTAACTGCGGAGGTAGTGGCATTCAACGCATCAGTCACCTGAGGTTTCGTACCTGCTTGGACTGTCT
TGGCCAGGGGAGCGTCATAGAAGAGCTGAACACTCGTTACCCGTTGCAGTCTCCAGGTGGAGATCTTCAAGCAGAGCAGA
CGATCAAGACTCCTATTGCTGCTCCTGTGGCGAGCTGA

Upstream 100 bases:

>100_bases
GAAGCCTTAAAGGCGCAATGGCTCTAATTCTTAACGAAGCCTTCGGGATCGTAATCGCAAAAATGTATGAAAATAACTGG
TCACTTAATGCACACAATCA

Downstream 100 bases:

>100_bases
TCGAGATTATTTAAGCTTTTGCAAGCGATTAAGACTATGCAGCTCCCTTAAGAAAGAGGAAGGTTGATCAATACATCAAT
GTTGTGCATTAAGACAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSICPNCGGSGIQRISHLRFRTCLDCLGQGSVIEELNTRYPLQSPGGDLQAEQTIKTPIAAPVAS

Sequences:

>Translated_65_residues
MSICPNCGGSGIQRISHLRFRTCLDCLGQGSVIEELNTRYPLQSPGGDLQAEQTIKTPIAAPVAS
>Mature_64_residues
SICPNCGGSGIQRISHLRFRTCLDCLGQGSVIEELNTRYPLQSPGGDLQAEQTIKTPIAAPVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6901; Mature: 6770

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICPNCGGSGIQRISHLRFRTCLDCLGQGSVIEELNTRYPLQSPGGDLQAEQTIKTPIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCC
APVAS
CCCCC
>Mature Secondary Structure 
SICPNCGGSGIQRISHLRFRTCLDCLGQGSVIEELNTRYPLQSPGGDLQAEQTIKTPIA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCC
APVAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA