Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022130
Identifier: 124022130
GI number: 124022130
Start: 420891
End: 422414
Strand: Reverse
Name: 124022130
Synonym: P9303_04201
Alternate gene names: NA
Gene position: 422414-420891 (Counterclockwise)
Preceding gene: 124022132
Following gene: 124022129
Centisome position: 15.75
GC content: 46.46
Gene sequence:
>1524_bases ATGAGCACATTAGCGAATGGATTGTCAAGCCCAATGGGATTTGCAGAGGCAACTGCATCAAAAAAAGTATCCCAGAATTT CACGACTCCAATACCCTCAGGAATTCTCACGCCAGACACCGTAAAGACGAGTGCTGGAACATTCAGATTTTTCGACGGCA TGCCTGACAAAGAGACGGTTCGGAAAAGTTTTGAAAATCTCAAGTTCATTCGTGGCTATGAGACATTTCTGACCTTGATG CCAGCAGCAAGCATTGAAATGCTTCGCCATGGTCATGCAGAAGTAGGAGTCGATAACCACACGAAGGTGGCATTGATGGC CCCCTTGAACTCGAACCCTCTGTTCCTGACAGGAAATACCGACACCGTCTACGGATCGACGTTCTTCAACCTGAAGCAGA CAGGGCCTCTGGTGATCGAGATCCCTGCCGGGCTTGGTCCAGGAACCATTAATGATGCCTTTTTCCGCTTTGTTGCTGAT ACTGGAGCTCCTGGGCCCGATAAGGGAAAAGGAGGAAAGTATCTCATCCTGGGGCCAGATGATGCTGAGCCAAATAATGC TGACGGCTATTTTGTTTTTCGTTCTCCTACGTATTCAAATTGGTTAATTCTTAGAGCTTTTCTTGATTCCAAGGGTAAGC CTGATCAAGCAATCGCTAATTATGAAAATGGTTTGCGTCTTTATCCCTATTCACAAAGGGACAACCCGGCTCAGATGAGC TTTATTCAAGTTGGTGAAAAGGTTTTCAATACAGTTCATGCCAATAATTTTGAGTTCTTTAATGAGCTCAATACCGTCAT TCAGCGTGAGCCCGTTGCTTTCCTTGATCCTGAGCTAAGGGGATTGGCATCTGCTATCGGATTGGAAAAAGGCAAACCTT TTTCTCCGTCTCCAGAAGACAAAGAGATCCTAGAGGAAGCAATTCAAGTTGGTGTTGCCTACGTGCGCTCCGACATGGGT AAGCCCCGCAATCAGGATGTTTACTTCTATCAAGGCAAAAAGTGGTTTACACCTTTTGGGGGTGGAAGTCATGAATGGCT TGTTGATAATGGTGCAGGTGGTCGAAATTTGGATGCTCGCAATAATTTCTTTTGGGGCTACACAGTAAATACACCAGCGA TGGTGTTGCAGATGATTGGGGCTGGGTCGCAATATGGCGTTGTGGCCACTGATGCTAATAGTCGTTATCTCGATGGAAGC AAAACTTACAAGTTCACGATTGATAAGGATGTGCCTGCGAAAGACTTTTGGTCGATGGTCGCTTACGACCCGCAGACACG GTCTGAGCTTCAGACTGGCCAGCTCTTGCCAAGCAAAAACAGTATCCGAAATCAGGATTTAGACGTAAACGCTGATGGCA GTATTGACCTCTATTTCGGCCCCAAGTCCCCCACGGGAAAAGAAGCCAATTGGATTGAAACTGTTCCTGGTAAGGGCTGG TTTGCTGTGTTTCGTCTCTACGGACCGCTGCAACCTTGGTTCGACAAAATTTGGCATCTCAATGACATTCAACCGATGGA ATAA
Upstream 100 bases:
>100_bases AGTACAATAAATAGATATGAAGAGCGATTGAATCATGATTAATCCATTCACTCAGGCTATCTGTAATCGCAGAGTCTCTA CTGTCATCGCTGGGATACTA
Downstream 100 bases:
>100_bases TCCCAGCCTAATTTTACTAATTTCTTCTAATTAAATCCATGAAACTTTTTAAATCTTCTCTCGCCTCTGCTCTTCTTTTG GCTAGTACTTGTCTGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSTLANGLSSPMGFAEATASKKVSQNFTTPIPSGILTPDTVKTSAGTFRFFDGMPDKETVRKSFENLKFIRGYETFLTLM PAASIEMLRHGHAEVGVDNHTKVALMAPLNSNPLFLTGNTDTVYGSTFFNLKQTGPLVIEIPAGLGPGTINDAFFRFVAD TGAPGPDKGKGGKYLILGPDDAEPNNADGYFVFRSPTYSNWLILRAFLDSKGKPDQAIANYENGLRLYPYSQRDNPAQMS FIQVGEKVFNTVHANNFEFFNELNTVIQREPVAFLDPELRGLASAIGLEKGKPFSPSPEDKEILEEAIQVGVAYVRSDMG KPRNQDVYFYQGKKWFTPFGGGSHEWLVDNGAGGRNLDARNNFFWGYTVNTPAMVLQMIGAGSQYGVVATDANSRYLDGS KTYKFTIDKDVPAKDFWSMVAYDPQTRSELQTGQLLPSKNSIRNQDLDVNADGSIDLYFGPKSPTGKEANWIETVPGKGW FAVFRLYGPLQPWFDKIWHLNDIQPME
Sequences:
>Translated_507_residues MSTLANGLSSPMGFAEATASKKVSQNFTTPIPSGILTPDTVKTSAGTFRFFDGMPDKETVRKSFENLKFIRGYETFLTLM PAASIEMLRHGHAEVGVDNHTKVALMAPLNSNPLFLTGNTDTVYGSTFFNLKQTGPLVIEIPAGLGPGTINDAFFRFVAD TGAPGPDKGKGGKYLILGPDDAEPNNADGYFVFRSPTYSNWLILRAFLDSKGKPDQAIANYENGLRLYPYSQRDNPAQMS FIQVGEKVFNTVHANNFEFFNELNTVIQREPVAFLDPELRGLASAIGLEKGKPFSPSPEDKEILEEAIQVGVAYVRSDMG KPRNQDVYFYQGKKWFTPFGGGSHEWLVDNGAGGRNLDARNNFFWGYTVNTPAMVLQMIGAGSQYGVVATDANSRYLDGS KTYKFTIDKDVPAKDFWSMVAYDPQTRSELQTGQLLPSKNSIRNQDLDVNADGSIDLYFGPKSPTGKEANWIETVPGKGW FAVFRLYGPLQPWFDKIWHLNDIQPME >Mature_506_residues STLANGLSSPMGFAEATASKKVSQNFTTPIPSGILTPDTVKTSAGTFRFFDGMPDKETVRKSFENLKFIRGYETFLTLMP AASIEMLRHGHAEVGVDNHTKVALMAPLNSNPLFLTGNTDTVYGSTFFNLKQTGPLVIEIPAGLGPGTINDAFFRFVADT GAPGPDKGKGGKYLILGPDDAEPNNADGYFVFRSPTYSNWLILRAFLDSKGKPDQAIANYENGLRLYPYSQRDNPAQMSF IQVGEKVFNTVHANNFEFFNELNTVIQREPVAFLDPELRGLASAIGLEKGKPFSPSPEDKEILEEAIQVGVAYVRSDMGK PRNQDVYFYQGKKWFTPFGGGSHEWLVDNGAGGRNLDARNNFFWGYTVNTPAMVLQMIGAGSQYGVVATDANSRYLDGSK TYKFTIDKDVPAKDFWSMVAYDPQTRSELQTGQLLPSKNSIRNQDLDVNADGSIDLYFGPKSPTGKEANWIETVPGKGWF AVFRLYGPLQPWFDKIWHLNDIQPME
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56094; Mature: 55962
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLANGLSSPMGFAEATASKKVSQNFTTPIPSGILTPDTVKTSAGTFRFFDGMPDKETV CCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCHHHH RKSFENLKFIRGYETFLTLMPAASIEMLRHGHAEVGVDNHTKVALMAPLNSNPLFLTGNT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCC DTVYGSTFFNLKQTGPLVIEIPAGLGPGTINDAFFRFVADTGAPGPDKGKGGKYLILGPD CEEECCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC DAEPNNADGYFVFRSPTYSNWLILRAFLDSKGKPDQAIANYENGLRLYPYSQRDNPAQMS CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHH FIQVGEKVFNTVHANNFEFFNELNTVIQREPVAFLDPELRGLASAIGLEKGKPFSPSPED HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCH KEILEEAIQVGVAYVRSDMGKPRNQDVYFYQGKKWFTPFGGGSHEWLVDNGAGGRNLDAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCC NNFFWGYTVNTPAMVLQMIGAGSQYGVVATDANSRYLDGSKTYKFTIDKDVPAKDFWSMV CCEEEEEECCCHHHHHHHHCCCCCCCEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHH AYDPQTRSELQTGQLLPSKNSIRNQDLDVNADGSIDLYFGPKSPTGKEANWIETVPGKGW HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC FAVFRLYGPLQPWFDKIWHLNDIQPME EEHEEHHCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure STLANGLSSPMGFAEATASKKVSQNFTTPIPSGILTPDTVKTSAGTFRFFDGMPDKETV CHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCHHHH RKSFENLKFIRGYETFLTLMPAASIEMLRHGHAEVGVDNHTKVALMAPLNSNPLFLTGNT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCC DTVYGSTFFNLKQTGPLVIEIPAGLGPGTINDAFFRFVADTGAPGPDKGKGGKYLILGPD CEEECCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC DAEPNNADGYFVFRSPTYSNWLILRAFLDSKGKPDQAIANYENGLRLYPYSQRDNPAQMS CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHH FIQVGEKVFNTVHANNFEFFNELNTVIQREPVAFLDPELRGLASAIGLEKGKPFSPSPED HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCH KEILEEAIQVGVAYVRSDMGKPRNQDVYFYQGKKWFTPFGGGSHEWLVDNGAGGRNLDAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCC NNFFWGYTVNTPAMVLQMIGAGSQYGVVATDANSRYLDGSKTYKFTIDKDVPAKDFWSMV CCEEEEEECCCHHHHHHHHCCCCCCCEEEECCCCEEECCCCEEEEEECCCCCHHHHHHHH AYDPQTRSELQTGQLLPSKNSIRNQDLDVNADGSIDLYFGPKSPTGKEANWIETVPGKGW HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC FAVFRLYGPLQPWFDKIWHLNDIQPME EEHEEHHCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA