Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022129
Identifier: 124022129
GI number: 124022129
Start: 419305
End: 420852
Strand: Reverse
Name: 124022129
Synonym: P9303_04191
Alternate gene names: NA
Gene position: 420852-419305 (Counterclockwise)
Preceding gene: 124022130
Following gene: 124022128
Centisome position: 15.69
GC content: 50.19
Gene sequence:
>1548_bases ATGAAACTTTTTAAATCTTCTCTCGCCTCTGCTCTTCTTTTGGCTAGTACTTGTCTGGCTGTTCAAGCCCAAGATCTTAA AGCGAGTAGATATAACACGCCAATCCCTGAGGATGTTCTGACTCCAGATCGTGTCAAAACAAGGCTTGGCTTATTTAATT ACTTCGATGGTTTTCCTGATGACGAAACCATGAGTCTTGCTCGCCGGCAGGTTGATTTAGGCCGTGGTGTGCAGACATTC CTCAATTTCATGCCAGCAGCGTCTCTAGAGATGCTCTACATGGGGCATCGTGATGGCTATGGCATGAAGCCAAATCAGGA CATCGGCATCTTTGATGAGCTGATGAGTTCCAAGTCTCTTTGGCTCACTGGTAATACCGATACGGTTTACGCCTCTACTT TTCTCGATCTCAGTGATGGTCCGATCATTGTGGAAGTCCCACCCGGTACCGGACCGGGAACAGTGAATGATGCCTTCTTC CGCTTTGTGGTTGATATGGGAGGCCCCGGCCCCGACAAGGGCAAGGGCGGTAAATATCTGATTCTTGGGCCAGGTCAACA GGCTCCTGCGACGACGGATGGATTTTTTGTGGCAAAGACCCCCAGCTACATCAACTGGTTGATTCTTCGTGGTTTTCTCG ATGAGGAAGGCAAGACTGATACAGCACGAGACAGCTTCAAAAATGGCTTGAAGGTGTACCCCTATGCCATGCGGGCAAAC CCTCAAGCCAACAATTTCAAGAACCTTACCGACTGGACGGTGAATACCATTCATGCCAATAATTTCAGGTTTTACGAAGA ACTCAATGAGGTAATCCAACGTGAACCTTCGGAGATGTTCTCCCCAGAGCTACTGGGTATGGCGTCAGCCATTGGCATTC AGAAAGGCAAGTCTTTTGCCCCGGATACTGAGCAGAAAGCGCTGCTCACTGAAGCTGTAGCCATCGGTAATGCCACTGCC CGTTCGATCCTGTTTTCTCCTCAGGATCCAAAGGCTTACATCTACCCAAATAGGGATGGTTACTGGCAAACCGGCTTTCC CGGAGGTAGTCACGAGTACCTCGTGAACAAAGGCAATGGTGGGCGCGATATGGATGGACGCACCCTTTTCTTCTATCTCG CTACGGTCAATACCCCGGCGATGGCGCTAGAGCTGCCTGGCGTGGGGTCTCAGTACGCCTTCTCCTCGCGTGACAGCAAC GGCGCATACCTCGATGGAGCCAACACCTACAAACTCACAATTCCGGCTAATGCTCCGGCCAATCGCTTCTGGTCGTTTGT GGTTTACGACCCCCAGACCCGTTCGATGCTGCAGAGCAAAGAACAGCCCTATCCAAGTAAAAACAGCAAACGCAACCAAG ACATGCTGGTGAATGATGATGGTTCAGTAGATCTTTACTTCGGGCCCAAAGCACCAGAAGGGAAAAAGACAAACTGGATC AAAACCATCCCCAGTAAAGGTTGGTTCGGGATCCTGCGGCTCTATGGTCCACTTGATCCCTGGTTCAATCAAACCTGGAA GCTGGGAGCCATCAAAAAGATGAACTGA
Upstream 100 bases:
>100_bases GACCGCTGCAACCTTGGTTCGACAAAATTTGGCATCTCAATGACATTCAACCGATGGAATAATCCCAGCCTAATTTTACT AATTTCTTCTAATTAAATCC
Downstream 100 bases:
>100_bases TTGCCAAGACGGATTGCCAAAACGTTGATCGTTCAGGCAACCGAGGTTGATTTGAATAGGGCATAGTACTGGTTATCATT CTTAGCAAGTTACTGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MKLFKSSLASALLLASTCLAVQAQDLKASRYNTPIPEDVLTPDRVKTRLGLFNYFDGFPDDETMSLARRQVDLGRGVQTF LNFMPAASLEMLYMGHRDGYGMKPNQDIGIFDELMSSKSLWLTGNTDTVYASTFLDLSDGPIIVEVPPGTGPGTVNDAFF RFVVDMGGPGPDKGKGGKYLILGPGQQAPATTDGFFVAKTPSYINWLILRGFLDEEGKTDTARDSFKNGLKVYPYAMRAN PQANNFKNLTDWTVNTIHANNFRFYEELNEVIQREPSEMFSPELLGMASAIGIQKGKSFAPDTEQKALLTEAVAIGNATA RSILFSPQDPKAYIYPNRDGYWQTGFPGGSHEYLVNKGNGGRDMDGRTLFFYLATVNTPAMALELPGVGSQYAFSSRDSN GAYLDGANTYKLTIPANAPANRFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAPEGKKTNWI KTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN
Sequences:
>Translated_515_residues MKLFKSSLASALLLASTCLAVQAQDLKASRYNTPIPEDVLTPDRVKTRLGLFNYFDGFPDDETMSLARRQVDLGRGVQTF LNFMPAASLEMLYMGHRDGYGMKPNQDIGIFDELMSSKSLWLTGNTDTVYASTFLDLSDGPIIVEVPPGTGPGTVNDAFF RFVVDMGGPGPDKGKGGKYLILGPGQQAPATTDGFFVAKTPSYINWLILRGFLDEEGKTDTARDSFKNGLKVYPYAMRAN PQANNFKNLTDWTVNTIHANNFRFYEELNEVIQREPSEMFSPELLGMASAIGIQKGKSFAPDTEQKALLTEAVAIGNATA RSILFSPQDPKAYIYPNRDGYWQTGFPGGSHEYLVNKGNGGRDMDGRTLFFYLATVNTPAMALELPGVGSQYAFSSRDSN GAYLDGANTYKLTIPANAPANRFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAPEGKKTNWI KTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN >Mature_515_residues MKLFKSSLASALLLASTCLAVQAQDLKASRYNTPIPEDVLTPDRVKTRLGLFNYFDGFPDDETMSLARRQVDLGRGVQTF LNFMPAASLEMLYMGHRDGYGMKPNQDIGIFDELMSSKSLWLTGNTDTVYASTFLDLSDGPIIVEVPPGTGPGTVNDAFF RFVVDMGGPGPDKGKGGKYLILGPGQQAPATTDGFFVAKTPSYINWLILRGFLDEEGKTDTARDSFKNGLKVYPYAMRAN PQANNFKNLTDWTVNTIHANNFRFYEELNEVIQREPSEMFSPELLGMASAIGIQKGKSFAPDTEQKALLTEAVAIGNATA RSILFSPQDPKAYIYPNRDGYWQTGFPGGSHEYLVNKGNGGRDMDGRTLFFYLATVNTPAMALELPGVGSQYAFSSRDSN GAYLDGANTYKLTIPANAPANRFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAPEGKKTNWI KTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57052; Mature: 57052
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFKSSLASALLLASTCLAVQAQDLKASRYNTPIPEDVLTPDRVKTRLGLFNYFDGFPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCC DETMSLARRQVDLGRGVQTFLNFMPAASLEMLYMGHRDGYGMKPNQDIGIFDELMSSKSL HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCE WLTGNTDTVYASTFLDLSDGPIIVEVPPGTGPGTVNDAFFRFVVDMGGPGPDKGKGGKYL EEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCEEE ILGPGQQAPATTDGFFVAKTPSYINWLILRGFLDEEGKTDTARDSFKNGLKVYPYAMRAN EECCCCCCCCCCCCEEEEECCCHHEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEEEEECC PQANNFKNLTDWTVNTIHANNFRFYEELNEVIQREPSEMFSPELLGMASAIGIQKGKSFA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCCC PDTEQKALLTEAVAIGNATARSILFSPQDPKAYIYPNRDGYWQTGFPGGSHEYLVNKGNG CCCHHHHHHHHHHHHCCCHHHEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEECCCC GRDMDGRTLFFYLATVNTPAMALELPGVGSQYAFSSRDSNGAYLDGANTYKLTIPANAPA CCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEECCCCCCCCEECCCCEEEEEECCCCCC NRFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAPEGKKTNWI CCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEE KTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN EECCCCCCEEEEEECCCCCHHHCCCEEECCEECCC >Mature Secondary Structure MKLFKSSLASALLLASTCLAVQAQDLKASRYNTPIPEDVLTPDRVKTRLGLFNYFDGFPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCC DETMSLARRQVDLGRGVQTFLNFMPAASLEMLYMGHRDGYGMKPNQDIGIFDELMSSKSL HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCE WLTGNTDTVYASTFLDLSDGPIIVEVPPGTGPGTVNDAFFRFVVDMGGPGPDKGKGGKYL EEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCEEE ILGPGQQAPATTDGFFVAKTPSYINWLILRGFLDEEGKTDTARDSFKNGLKVYPYAMRAN EECCCCCCCCCCCCEEEEECCCHHEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEEEEECC PQANNFKNLTDWTVNTIHANNFRFYEELNEVIQREPSEMFSPELLGMASAIGIQKGKSFA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCCC PDTEQKALLTEAVAIGNATARSILFSPQDPKAYIYPNRDGYWQTGFPGGSHEYLVNKGNG CCCHHHHHHHHHHHHCCCHHHEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEECCCC GRDMDGRTLFFYLATVNTPAMALELPGVGSQYAFSSRDSNGAYLDGANTYKLTIPANAPA CCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEECCCCCCCCEECCCCEEEEEECCCCCC NRFWSFVVYDPQTRSMLQSKEQPYPSKNSKRNQDMLVNDDGSVDLYFGPKAPEGKKTNWI CCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEE KTIPSKGWFGILRLYGPLDPWFNQTWKLGAIKKMN EECCCCCCEEEEEECCCCCHHHCCCEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA