Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022090
Identifier: 124022090
GI number: 124022090
Start: 384158
End: 385543
Strand: Reverse
Name: 124022090
Synonym: P9303_03801
Alternate gene names: NA
Gene position: 385543-384158 (Counterclockwise)
Preceding gene: 124022092
Following gene: 124022089
Centisome position: 14.37
GC content: 56.35
Gene sequence:
>1386_bases ATGGTTAACGGCTTGCAAAGCCTGCTCCATGCCACCCAGCCAACCAATTTGTGGCTGGCCCTAAGTCTGCTGACTGTGCT GGCCTTGTTGCTGAGCTTGGGGCGAAGGCTCGAGCCTGCCCTGCGACTGGAGCGGCTAGGCCTGCCTATTGCCCTGTTGG CCGGCACAGCAGGCCTGCTGCTGGGGCCCTATGGCCCCCTACCCCTGCTGCCACTGAGCGTAACGGACATCTGGACTGAA GTTCCAACAGCGTTGCTTACCCTGGTCTTCGCCACCTTGATGCTCGGGCGCCCCCTCCCGAAAGGTCAAGGCTTATGGGA GCCTGTGGCATCCCAGGCCATGCTGGGAATGATGCTGGGTTTTGGTCAATACCTAGTAGGGGGACTAGCAGTCCTACTGG TGTTGATTCCCTTGCTGGGGGTTGATCCGCTCATGGGCTGCCTGATTGAAGTGGGTTTTGAGGGCGGCCATGGGGCAGCG GCCGTTATGGGTGAAAGCTTTCGCGAACTCGGCTTTCCCGGTGGCCAAGATCTTGGCCTAGCAATGGCAACAGTGGGCCT GCTCACATCAACCCTTCTGGGCAGTGTCCTGGTGATTTTCGGCCGTTGGCGTGGATGGGTTGCCCCCCATGGCCCCACAG AAATCGGAGACACAGGAGCTGTTGAAGAAGAAACGAGTTTTGGACAACAACTTCGCCTGCTGGCCGTAAATCTTGGCCTG GCTGGAGCCGCTGTTGCTTGCGGCGTGTTGATGCTCGAAGGCTTGCGATTATTGGGCCCTTGGCTGGGGGAGTTCTACCG GCAAGTCATTCACGTCTTCCCAGTCTTTCCTCTTGCACTAGGGGGTTCACTACTGATCCGACTAGCCCTGGAAGTCTCGG GCCAAACTCAATGGGTATCTCAGTTATTGCAACGTGAAATCGGCATCCTGGCCACCGACCTGCTGATCACCACTGCAATG GCAAGCCTGAATCTGCCGCTGCTGCAACACGACTGGCTTCCGCTAACTGTGTTGTCTGTAACAGGGCTGGCCTGGAATCT ATTGATCATGCTCTTTGTGGCCAGGTTCACACTGCGCGAGGAATGGTTCGAGCGCTCGATCACCGAGTTCGGACAGGCCA CTGGAGTCGCTGCGAGTGGCCTTTTGCTGCTTCGACTGGCCGATCCCCGCAACCTTACAAAAGCCTTACCTGTGTTTTCG ATCAAACAATTGATCCTGCAACCCATTCTCTCTGGTGGGGTGATCACCGTTGTAGCCCCTCTAGCAGTGACTCGGTTGGG ACTGCTTGGCTGGACAGAACTTTGCGGCATTCTTACTGTTATATGTATTGGATTAGCGGTGATCATCAACATCACCTCAT CATCAGAATCAACAGAAGCTGCGTAA
Upstream 100 bases:
>100_bases AGTCATGGCTTTCAAGATGGCGCAATACATATCGAAGTTCTCCAGAACACAAGACACCATCTGAACCGCTGCTTTGATCT AAAGCCACTAGACGGCTCCC
Downstream 100 bases:
>100_bases ATAACGACGAAAGACCAATGCACATTTGCTAGCAATATTTTGACGAAATCTGCATATTTCTATACATCAATAGAGTGGAA ATCCGCAATGCAATGAATTA
Product: sodium:solute symporter, ESS family
Products: NA
Alternate protein names: Na+/Glutamate Symporter; Sodium/Solute Symporter Family Protein; Sodium/Glutamate Symporter Superfamily; SodiumSolute Symporter ESS Family; Sodium/Glutamate Symport Carrier Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MVNGLQSLLHATQPTNLWLALSLLTVLALLLSLGRRLEPALRLERLGLPIALLAGTAGLLLGPYGPLPLLPLSVTDIWTE VPTALLTLVFATLMLGRPLPKGQGLWEPVASQAMLGMMLGFGQYLVGGLAVLLVLIPLLGVDPLMGCLIEVGFEGGHGAA AVMGESFRELGFPGGQDLGLAMATVGLLTSTLLGSVLVIFGRWRGWVAPHGPTEIGDTGAVEEETSFGQQLRLLAVNLGL AGAAVACGVLMLEGLRLLGPWLGEFYRQVIHVFPVFPLALGGSLLIRLALEVSGQTQWVSQLLQREIGILATDLLITTAM ASLNLPLLQHDWLPLTVLSVTGLAWNLLIMLFVARFTLREEWFERSITEFGQATGVAASGLLLLRLADPRNLTKALPVFS IKQLILQPILSGGVITVVAPLAVTRLGLLGWTELCGILTVICIGLAVIINITSSSESTEAA
Sequences:
>Translated_461_residues MVNGLQSLLHATQPTNLWLALSLLTVLALLLSLGRRLEPALRLERLGLPIALLAGTAGLLLGPYGPLPLLPLSVTDIWTE VPTALLTLVFATLMLGRPLPKGQGLWEPVASQAMLGMMLGFGQYLVGGLAVLLVLIPLLGVDPLMGCLIEVGFEGGHGAA AVMGESFRELGFPGGQDLGLAMATVGLLTSTLLGSVLVIFGRWRGWVAPHGPTEIGDTGAVEEETSFGQQLRLLAVNLGL AGAAVACGVLMLEGLRLLGPWLGEFYRQVIHVFPVFPLALGGSLLIRLALEVSGQTQWVSQLLQREIGILATDLLITTAM ASLNLPLLQHDWLPLTVLSVTGLAWNLLIMLFVARFTLREEWFERSITEFGQATGVAASGLLLLRLADPRNLTKALPVFS IKQLILQPILSGGVITVVAPLAVTRLGLLGWTELCGILTVICIGLAVIINITSSSESTEAA >Mature_461_residues MVNGLQSLLHATQPTNLWLALSLLTVLALLLSLGRRLEPALRLERLGLPIALLAGTAGLLLGPYGPLPLLPLSVTDIWTE VPTALLTLVFATLMLGRPLPKGQGLWEPVASQAMLGMMLGFGQYLVGGLAVLLVLIPLLGVDPLMGCLIEVGFEGGHGAA AVMGESFRELGFPGGQDLGLAMATVGLLTSTLLGSVLVIFGRWRGWVAPHGPTEIGDTGAVEEETSFGQQLRLLAVNLGL AGAAVACGVLMLEGLRLLGPWLGEFYRQVIHVFPVFPLALGGSLLIRLALEVSGQTQWVSQLLQREIGILATDLLITTAM ASLNLPLLQHDWLPLTVLSVTGLAWNLLIMLFVARFTLREEWFERSITEFGQATGVAASGLLLLRLADPRNLTKALPVFS IKQLILQPILSGGVITVVAPLAVTRLGLLGWTELCGILTVICIGLAVIINITSSSESTEAA
Specific function: Unknown
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48823; Mature: 48823
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNGLQSLLHATQPTNLWLALSLLTVLALLLSLGRRLEPALRLERLGLPIALLAGTAGLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHH LGPYGPLPLLPLSVTDIWTEVPTALLTLVFATLMLGRPLPKGQGLWEPVASQAMLGMMLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FGQYLVGGLAVLLVLIPLLGVDPLMGCLIEVGFEGGHGAAAVMGESFRELGFPGGQDLGL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH AMATVGLLTSTLLGSVLVIFGRWRGWVAPHGPTEIGDTGAVEEETSFGQQLRLLAVNLGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH AGAAVACGVLMLEGLRLLGPWLGEFYRQVIHVFPVFPLALGGSLLIRLALEVSGQTQWVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QLLQREIGILATDLLITTAMASLNLPLLQHDWLPLTVLSVTGLAWNLLIMLFVARFTLRE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFERSITEFGQATGVAASGLLLLRLADPRNLTKALPVFSIKQLILQPILSGGVITVVAP HHHHHHHHHHHHHCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAVTRLGLLGWTELCGILTVICIGLAVIINITSSSESTEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVNGLQSLLHATQPTNLWLALSLLTVLALLLSLGRRLEPALRLERLGLPIALLAGTAGLL CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHH LGPYGPLPLLPLSVTDIWTEVPTALLTLVFATLMLGRPLPKGQGLWEPVASQAMLGMMLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FGQYLVGGLAVLLVLIPLLGVDPLMGCLIEVGFEGGHGAAAVMGESFRELGFPGGQDLGL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH AMATVGLLTSTLLGSVLVIFGRWRGWVAPHGPTEIGDTGAVEEETSFGQQLRLLAVNLGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH AGAAVACGVLMLEGLRLLGPWLGEFYRQVIHVFPVFPLALGGSLLIRLALEVSGQTQWVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QLLQREIGILATDLLITTAMASLNLPLLQHDWLPLTVLSVTGLAWNLLIMLFVARFTLRE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFERSITEFGQATGVAASGLLLLRLADPRNLTKALPVFSIKQLILQPILSGGVITVVAP HHHHHHHHHHHHHCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAVTRLGLLGWTELCGILTVICIGLAVIINITSSSESTEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA