Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is argH
Identifier: 124021727
GI number: 124021727
Start: 15728
End: 17140
Strand: Direct
Name: argH
Synonym: P9303_00121
Alternate gene names: 124021727
Gene position: 15728-17140 (Clockwise)
Preceding gene: 124021726
Following gene: 124021728
Centisome position: 0.59
GC content: 50.81
Gene sequence:
>1413_bases ATGGCAGGTGGAGTAACCGGTGGTTCTGCAGAAGGCTGGAGCAAAAGGTTTGAAGAGGGATTGCATCCGGTTATTGAGCG GTTCAATGCTTCCATCAGCTTTGACATCACTCTGCTCCAAGAAGATTTAGATGGGTCTATCGCTCATGCACGCATGCTTG GCGAATGTGGAGTGATCAGTCTTGAAGAGGCCGCTCAGCTTGAGGGCGGCCTTGAGAAAATCCGCTCAGAGGCAGCGGCA GGAGAGTTTCAGCCAGGACTTGTTGATGAAGATGTTCATTTCGCTGTTGAACGGCGCCTGATCGCTTTATTAGGGCCTGT CGGCAAGAAACTTCATACCGGCCGAAGTCGCAATGATCAGGTAGGCACGGATCTGCGCTTGTGGTTACGGCGTCGCTTGG ATGATTTGGATTGTGAACTGGAGCGGTTTCAGAATGCTCTTTTGACACAGGCAGAATCCCATCGTCAAACTTTGATTCCC GGCTACACCCACTTACAGCGTGCCCAGCCGCTTTGCTTGGCCCATCATCTTTTGGCTTATATCGAGATGATCCAAAGGGA TAGAGATCGGCTTAAAGATGTTCGCGGACGAGTCAATATTTCGCCGCTTGGTGCGGCTGCCCTTGCAGGAACATCAGTGC CTATTGATCGCCAAAATACAGCAGCAGCACTTGGCTTTGAGTGTATTTACGCGAATAGTCTGGATGCGGTAAGTGATCGC GATTTTGCTGTTGAGTACACAGCGGCGGCTTCGTTGGTCATGGTCCATCTCAGTCGCCTGGCGGAGGAGGTGATTTTCTG GGCGTCTGAGGAATTTGCATTTGTGCGTCTCAGCGACCGTTGTGCCACTGGCAGCAGCTTGATGCCTCAGAAGAAGAATC CTGATGTGCCTGAATTGGTACGAGGCAAATGTGGTCGTGTGTTTGGTCACCTTCAGGGTCTCCTGACCATGATTAAGGGA TTGCCATTGGCTTACAACAAGGATTTTCAGGAGGATAAGGAAGCTCTCTTTGACACCGTTCGCACTACTAAAGATTGTGT GGAAGCCATGTCGATTTTGATGGAGCAAGGGTTGGAGTTTTGTTCGGAACGCTTGGCAGCTGCCGTTGAATCCGATTTTT CCAATGCCACTGATGTGGCTGACTACCTGGTTGCTAAAGGAGTGCCCTTTCGGGAGGCCTACCAATTGGTGGGTGCGGTT GTGAAGCGTTGTTTAGACGAAGGGATTTTGCTTTGTGATCTAAGCCTTGAACAATGGCAGGAATTTCACTCCGCTATTGC TGAGGATTTGCATGAAGCATTGGCTCCAAAGCGGGTTGTGGCTGTGCGGATTAGTGAAGGTGGCACTGGTTTTGATCGAG TTGAGGAGCAATTGCGTCACTGGCGTAGCCGCCTTGATTCCGGAGTGTCATGA
Upstream 100 bases:
>100_bases AAGATGATGCCTCAATGGTGGTTTTGAAAGTGCCAGAGGAGGTAACGCTGCCTTCTGTGTCCCTGGCCTGACAAGCTGTT GACTCGCTGCTCATGAAGGG
Downstream 100 bases:
>100_bases TCGAAATGCCTCGGCGGGTCTACGCTGATAGCGCCAAAGGTGGATTGATTCATTCCCGAATCATGAACTAATGGCTATAC CTGGCCAATTGGTCCACTAC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MAGGVTGGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVISLEEAAQLEGGLEKIRSEAAA GEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDDLDCELERFQNALLTQAESHRQTLIP GYTHLQRAQPLCLAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDR DFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKG LPLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEQGLEFCSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAV VKRCLDEGILLCDLSLEQWQEFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSGVS
Sequences:
>Translated_470_residues MAGGVTGGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVISLEEAAQLEGGLEKIRSEAAA GEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDDLDCELERFQNALLTQAESHRQTLIP GYTHLQRAQPLCLAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDR DFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKG LPLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEQGLEFCSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAV VKRCLDEGILLCDLSLEQWQEFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSGVS >Mature_469_residues AGGVTGGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVISLEEAAQLEGGLEKIRSEAAAG EFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDDLDCELERFQNALLTQAESHRQTLIPG YTHLQRAQPLCLAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDRD FAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGL PLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEQGLEFCSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAVV KRCLDEGILLCDLSLEQWQEFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSGVS
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=459, Percent_Identity=43.7908496732026, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI68303542, Length=459, Percent_Identity=43.7908496732026, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI68303547, Length=459, Percent_Identity=41.1764705882353, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI68303549, Length=459, Percent_Identity=41.3943355119826, Blast_Score=331, Evalue=8e-91, Organism=Escherichia coli, GI1790398, Length=454, Percent_Identity=47.136563876652, Blast_Score=405, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6321806, Length=469, Percent_Identity=43.2835820895522, Blast_Score=346, Evalue=4e-96, Organism=Drosophila melanogaster, GI221473854, Length=449, Percent_Identity=41.6481069042316, Blast_Score=334, Evalue=8e-92, Organism=Drosophila melanogaster, GI78706858, Length=449, Percent_Identity=41.6481069042316, Blast_Score=334, Evalue=8e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_PROM3 (A2C5K9)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016034.1 - ProteinModelPortal: A2C5K9 - SMR: A2C5K9 - STRING: A2C5K9 - GeneID: 4776025 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_00121 - eggNOG: COG0165 - HOGENOM: HBG539632 - OMA: MAEDLIF - ProtClustDB: PRK00855 - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 51975; Mature: 51843
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGVTGGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVIS CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHHHHHHHCCCCEE LEEAAQLEGGLEKIRSEAAAGEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VGTDLRLWLRRRLDDLDCELERFQNALLTQAESHRQTLIPGYTHLQRAQPLCLAHHLLAY CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH IEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDR HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCC DFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELV CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH RGKCGRVFGHLQGLLTMIKGLPLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEQGLEF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAVVKRCLDEGILLCDLSLEQWQ HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH EFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSGVS HHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGGVTGGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHHHHHHHCCCCEE LEEAAQLEGGLEKIRSEAAAGEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VGTDLRLWLRRRLDDLDCELERFQNALLTQAESHRQTLIPGYTHLQRAQPLCLAHHLLAY CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHH IEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDR HHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCC DFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELV CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHH RGKCGRVFGHLQGLLTMIKGLPLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEQGLEF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAVVKRCLDEGILLCDLSLEQWQ HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH EFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSGVS HHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA