| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is argC
Identifier: 124025698
GI number: 124025698
Start: 910235
End: 911314
Strand: Direct
Name: argC
Synonym: NATL1_09911
Alternate gene names: 124025698
Gene position: 910235-911314 (Clockwise)
Preceding gene: 124025696
Following gene: 124025700
Centisome position: 48.81
GC content: 35.0
Gene sequence:
>1080_bases ATGGCAAAAAGTACATCGAAAACTGGGAGGATCGCAATTATTGGAGCATCTGGATACGGTGGACTTCAACTAGTCAAGTT GATCAATGAGCATCCTAATTTCGAGATTTCAACCCTAAATGGTGAGCGATCAGTGGGTAAAAACTGGAATGAAATAAATC CTTTTATGAAAATTTTGCAAGATAAAAAGATTACTAAAAGCAATATTGACGAAATCGCTCTTGATTCTGATTATGCAATA TTAAGTCTTCCTAATGGCTTATCATCACAGTTAACACCTTTATTGTTAAAAAAAGGTGTTAAGGTCCTCGATTTGTCGGC TGATTATAGATTTAAATCTCTTGATAAATGGAAAGAAGTCTATACAAAAGAGGCAGCGAAATATAAAAGATATGACTACG AATTATGTGAAGAGGCTATTTATGGTTTTTCAGAAGAATTTAGTAGCGAAATCTCAAAGTCAAGATTAATTGCCTGTCCA GGTTGCTATCCAACTGCCTCACTTAGTTTACTTATTCCATTTTTAAAACAAGGTTTAATAGAAAGTGAGGGGATTATTGT TGATGCAAAATCTGGTACATCTGGTGGTGGGAGAAATCCAAATGAGCAACTATTATTGTCTGAATGCTCTGAATCAATTA GCCCCTATGGAGTTATTGGACATAGGCACACGGCTGAAATAGAAAGGATTGCCAGTCATTTTGCTGGTCACGAAGTCAAT TTACAATTCACTCCTCATTTAGTGCCAATGGTTAGAGGGATTTTGTCGACAGTTTACGCTCGTTTAAGAGATCCCGGATT AACAGCTGAAGACTGCAAAATTGTAATTGAAGCTTTTTATAAAGATCAACCATTTATTGATATCCTGCCTGTAGGAATAT ATCCAGCAACTAAATGGGTTAAAAATACTAATAAAGTTATGATTTCTGTTGAAGTAGATAAACGTAACGGAAGAATTGTT CTAATGAGTGTTATAGATAATCTTCTAAAAGGTCAAGCAGGACAGGCAGTCCAAAATTTAAATATTATGCACGGACTTGA ATCAGATATTGGTCTTCCTAAGATTACTTTTTATCCTTGA
Upstream 100 bases:
>100_bases CTTCTGATTTCAACTTATTCCTCGTGTTTGTGGTGAAATGGTTCTTTGCTAATTATTCTCAAATGAATATCTCCTCATTC TACGAAATAACATTGATGTT
Downstream 100 bases:
>100_bases AACTAGTTCTAATTTCAATTGCTACTTTAGCAATCGCTAAAGGTAATATTATATGTTCCATATCTTGAATTCTTTTTTTT AAGGTTTCTATACTATCTTT
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAKSTSKTGRIAIIGASGYGGLQLVKLINEHPNFEISTLNGERSVGKNWNEINPFMKILQDKKITKSNIDEIALDSDYAI LSLPNGLSSQLTPLLLKKGVKVLDLSADYRFKSLDKWKEVYTKEAAKYKRYDYELCEEAIYGFSEEFSSEISKSRLIACP GCYPTASLSLLIPFLKQGLIESEGIIVDAKSGTSGGGRNPNEQLLLSECSESISPYGVIGHRHTAEIERIASHFAGHEVN LQFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGIYPATKWVKNTNKVMISVEVDKRNGRIV LMSVIDNLLKGQAGQAVQNLNIMHGLESDIGLPKITFYP
Sequences:
>Translated_359_residues MAKSTSKTGRIAIIGASGYGGLQLVKLINEHPNFEISTLNGERSVGKNWNEINPFMKILQDKKITKSNIDEIALDSDYAI LSLPNGLSSQLTPLLLKKGVKVLDLSADYRFKSLDKWKEVYTKEAAKYKRYDYELCEEAIYGFSEEFSSEISKSRLIACP GCYPTASLSLLIPFLKQGLIESEGIIVDAKSGTSGGGRNPNEQLLLSECSESISPYGVIGHRHTAEIERIASHFAGHEVN LQFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGIYPATKWVKNTNKVMISVEVDKRNGRIV LMSVIDNLLKGQAGQAVQNLNIMHGLESDIGLPKITFYP >Mature_358_residues AKSTSKTGRIAIIGASGYGGLQLVKLINEHPNFEISTLNGERSVGKNWNEINPFMKILQDKKITKSNIDEIALDSDYAIL SLPNGLSSQLTPLLLKKGVKVLDLSADYRFKSLDKWKEVYTKEAAKYKRYDYELCEEAIYGFSEEFSSEISKSRLIACPG CYPTASLSLLIPFLKQGLIESEGIIVDAKSGTSGGGRNPNEQLLLSECSESISPYGVIGHRHTAEIERIASHFAGHEVNL QFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGIYPATKWVKNTNKVMISVEVDKRNGRIVL MSVIDNLLKGQAGQAVQNLNIMHGLESDIGLPKITFYP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=338, Percent_Identity=33.7278106508876, Blast_Score=162, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320913, Length=352, Percent_Identity=28.6931818181818, Blast_Score=118, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_PROM1 (A2C239)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014814.1 - ProteinModelPortal: A2C239 - SMR: A2C239 - STRING: A2C239 - GeneID: 4780017 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_09911 - eggNOG: COG0002 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: PMAR167555:NATL1_09911-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 39740; Mature: 39609
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 162-162
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSTSKTGRIAIIGASGYGGLQLVKLINEHPNFEISTLNGERSVGKNWNEINPFMKILQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DKKITKSNIDEIALDSDYAILSLPNGLSSQLTPLLLKKGVKVLDLSADYRFKSLDKWKEV CCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH YTKEAAKYKRYDYELCEEAIYGFSEEFSSEISKSRLIACPGCYPTASLSLLIPFLKQGLI HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCC ESEGIIVDAKSGTSGGGRNPNEQLLLSECSESISPYGVIGHRHTAEIERIASHFAGHEVN CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCEEE LQFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGIYPATKWV EEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH KNTNKVMISVEVDKRNGRIVLMSVIDNLLKGQAGQAVQNLNIMHGLESDIGLPKITFYP CCCCEEEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECC >Mature Secondary Structure AKSTSKTGRIAIIGASGYGGLQLVKLINEHPNFEISTLNGERSVGKNWNEINPFMKILQ CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DKKITKSNIDEIALDSDYAILSLPNGLSSQLTPLLLKKGVKVLDLSADYRFKSLDKWKEV CCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH YTKEAAKYKRYDYELCEEAIYGFSEEFSSEISKSRLIACPGCYPTASLSLLIPFLKQGLI HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCC ESEGIIVDAKSGTSGGGRNPNEQLLLSECSESISPYGVIGHRHTAEIERIASHFAGHEVN CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCEEE LQFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGIYPATKWV EEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH KNTNKVMISVEVDKRNGRIVLMSVIDNLLKGQAGQAVQNLNIMHGLESDIGLPKITFYP CCCCEEEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA