Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
---|---|
Accession | NC_008819 |
Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is hisH [H]
Identifier: 124025583
GI number: 124025583
Start: 813516
End: 814169
Strand: Direct
Name: hisH [H]
Synonym: NATL1_08761
Alternate gene names: 124025583
Gene position: 813516-814169 (Clockwise)
Preceding gene: 124025582
Following gene: 124025584
Centisome position: 43.63
GC content: 31.19
Gene sequence:
>654_bases ATGAAGGTAGGTATAATTGATTATGGAGTAGGTAACTTAAGAAGTATTTCTAATGCTCTTAATGAAATAGGAGCTGAAAA TATAGTATCAAGCAATAAGAAAGAATTGGAAGAATGTCAGCGACTAATACTTCCAGGAGTTGGAGCATTTAATCATGGTG TTAATTCTCTGCGAGAAAGAGATCTAATAAATTTTATAAAAAATCAACATTTTAATAAAATACCTATCCTAGGAATATGC TTGGGCATGCAACTTTTAACTGAAGCAAGCTATGAATTTGGTGAAACAAAAGGTTTAGAAATTATTGAAGGCAAAGTTAA AAAGATTGAAGATATGAACAATCTCGAAAAAAGTCTAAGACTTCCTATCGTTGGTTGGTTTCACATCAAAGAAACAAATA TTAAGGCTAAGAAAAATTATTTTTTAGATAAAGTGCTCACAAAAAGACTAAAAGGGGCGAAATACTATTTTATTCATTCT TATAGTGTTAACAGTGAGTCAAATGATGTAATTGCTGTTACTGAACATTTACAAACTAAAACAACGGCGGTAATTGCAAA AGGAAATACTATTGGCACTCAATTCCATCCAGAAAAAAGCGGGATCTATGGTTTAGAATTCTTAAAAAGCTTTATATTTG CAGCCCTCAGCTAA
Upstream 100 bases:
>100_bases AACCTTCTGCTATTGCTATCGCAGGCTCTTTACATTACAAGAAAGATACCGTAAGTAGTATAAAACAAGAAATTAATTCT TTGTTTATACAAGAAAAAAA
Downstream 100 bases:
>100_bases GAATGGAATACAGTATTTCTTTGAATGTTCTATTCTTTTATCATCTATATTGTTATTTGTTTATCTTTGGATCTTCAGCA ATTTGAACACAGATTTCATT
Product: glutamine amidotransferase
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKVGIIDYGVGNLRSISNALNEIGAENIVSSNKKELEECQRLILPGVGAFNHGVNSLRERDLINFIKNQHFNKIPILGIC LGMQLLTEASYEFGETKGLEIIEGKVKKIEDMNNLEKSLRLPIVGWFHIKETNIKAKKNYFLDKVLTKRLKGAKYYFIHS YSVNSESNDVIAVTEHLQTKTTAVIAKGNTIGTQFHPEKSGIYGLEFLKSFIFAALS
Sequences:
>Translated_217_residues MKVGIIDYGVGNLRSISNALNEIGAENIVSSNKKELEECQRLILPGVGAFNHGVNSLRERDLINFIKNQHFNKIPILGIC LGMQLLTEASYEFGETKGLEIIEGKVKKIEDMNNLEKSLRLPIVGWFHIKETNIKAKKNYFLDKVLTKRLKGAKYYFIHS YSVNSESNDVIAVTEHLQTKTTAVIAKGNTIGTQFHPEKSGIYGLEFLKSFIFAALS >Mature_217_residues MKVGIIDYGVGNLRSISNALNEIGAENIVSSNKKELEECQRLILPGVGAFNHGVNSLRERDLINFIKNQHFNKIPILGIC LGMQLLTEASYEFGETKGLEIIEGKVKKIEDMNNLEKSLRLPIVGWFHIKETNIKAKKNYFLDKVLTKRLKGAKYYFIHS YSVNSESNDVIAVTEHLQTKTTAVIAKGNTIGTQFHPEKSGIYGLEFLKSFIFAALS
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=212, Percent_Identity=34.4339622641509, Blast_Score=109, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6319725, Length=221, Percent_Identity=35.2941176470588, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 24335; Mature: 24335
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGIIDYGVGNLRSISNALNEIGAENIVSSNKKELEECQRLILPGVGAFNHGVNSLRER CEEEEEECCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH DLINFIKNQHFNKIPILGICLGMQLLTEASYEFGETKGLEIIEGKVKKIEDMNNLEKSLR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPIVGWFHIKETNIKAKKNYFLDKVLTKRLKGAKYYFIHSYSVNSESNDVIAVTEHLQTK CCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEHHHHHCH TTAVIAKGNTIGTQFHPEKSGIYGLEFLKSFIFAALS HEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKVGIIDYGVGNLRSISNALNEIGAENIVSSNKKELEECQRLILPGVGAFNHGVNSLRER CEEEEEECCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH DLINFIKNQHFNKIPILGICLGMQLLTEASYEFGETKGLEIIEGKVKKIEDMNNLEKSLR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPIVGWFHIKETNIKAKKNYFLDKVLTKRLKGAKYYFIHSYSVNSESNDVIAVTEHLQTK CCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEHHHHHCH TTAVIAKGNTIGTQFHPEKSGIYGLEFLKSFIFAALS HEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA