Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is gumC
Identifier: 124025584
GI number: 124025584
Start: 814881
End: 816605
Strand: Direct
Name: gumC
Synonym: NATL1_08771
Alternate gene names: NA
Gene position: 814881-816605 (Clockwise)
Preceding gene: 124025583
Following gene: 124025588
Centisome position: 43.7
GC content: 30.61
Gene sequence:
>1725_bases ATGAATTCTATTAATGAGGCTTCTGTAAATGATGGAAGAGCCATTCCACTTTTAGAAGATGAGATTGATATTAAAAATAT TCTTTATTCTCTAAATAGAAATAGAAGATTAATTGCAAAATTCATTTTTTCTGGCTTATTTATTAGTGGTTTGATTATTT TTTCCACCAAAAGAGTTTGGGAAGGCGAATTCCAAATAGTTCTAGAAAATAATGAGGTAAATCGACCTTCTCTCTTGAAA GAGAGTGGTCTTTCAAATGTTTTAAATATATCAGGTGGGAATGATTCATTAATAACAGAAGTTGGAATACTCAAAAGTCC ATTAGTTTTAATGAATATTTTTGAATTTGTGAAGAAAGAAAAAGAATTTAAAAATAATCAAATAAGAAATTTAAATTTTA AAAAATGGAAAGAATCTTACTTGAAAATTGACTTGGAGAAAAACAGTACAATATTAAATATTACCTACAAAGATAATGAT AAAGACCTTGTTATTCCAGTACTTAATAAAATCTCTACGACTTACCAAGATTATTCAGGTAGAAAAAGACTTAGAGGACT TGAATTAGGTTCAAATTTTTATGAAGAACAAATTGGTATATTTAAGAGTAGAAGCATTGATTCACTTAGAAAATCTCAGA AATTCGCAAATGATCAGGATTTGAGTGTTCTTCCAAATGATTTTAAATCAATAGAATCAGCATCAGAATTAATTACCAGT TCATCTATAGATCTAGAAATACCTAACGCTATAAATATCGAGGCTATTAGAGTGGCAGCTGCAAATAAAATTAGATTTAT CGATCAACAATTAGAGCAAATAAATAAGTTAAATGACCAATCCTCTGAACAAATCATGTATATAGCCTCAACAATACCAG CTCTTCAAGAACTTTCAGCCAAATTAAAATTATTTGAATCTGATTTGGCGAGATTAAGGCTAATTTATAAGGAAAGTGAT AAGAATATCAAGAATTTAGTTGAACAGAGAAATTTCTCGATTGAATTGTTGAAGAGACAAGTAAAAGGATTTTTAATTGC TCAAAAAGCAGATGCTCAAGCACGCTTGAAGTCCGCAGAACGCCCTGCAGGCACATTAATAGAATATAAAATGCTTTTAA GTAACGCTTTTAAAGATAAAGCAACTCTAGATAACCTAGAGAATGAATATAGGAAACTTTTACTTGAAAAGGCACGAAGC ACTGATCCCTGGGAACTAATTACAACTCCAACATTATCTCCGAATCCAATTGCACCTAAAAAGATAAAAATCCTTGCTCT TGGTCTTATAGCTGGAATATTTACTGGTAGTGTTGCCGCATTAATTTCTGATAAAAGAAAAGATATTATTTTTTCTTTAG TTGAAATTGAGTCTTATGGTTTTGGTCCTGTGCTTACTGAACTATCTTTTGTTCAAAAGCAATCTTGGACAGAATCTATT GATTTAGTTATATCTGGACCACTATCAGAAATTAAAGGCAGCATTGCTTTTCTTGCTGTTGGCGAAATTGATGAAGAAGA ACTAATGCACCTTAGTAAACTATTAAGGAAATTTACAAATAGTCCTGAGATAATAATTACTAAGGACTTGAGAGAGGCAG TACAATGCCCCAACTTGATAGTTATAACTGCTTTAGGAATTACGCGAAATCAAGAACTTATCGAAGCTAGGCAAAAGCTT TTATTGCAAAGAACATCAATTTTGGGATTAATTGCTTTAACTTAA
Upstream 100 bases:
>100_bases AATTTGCAGTAAAAAGTAATTGATATATATAATTATTTTTTCTTGAATAGTTCTTTTAATATAGTATTCTTAATTTAATT CAAAGGGTTTTTCATAGAGA
Downstream 100 bases:
>100_bases TATTCTATTTAAATATATAAAAATTTAAAAATTTTCTATACCTATGCTATGCAATCTTATTGTTTGTCAGTTGTTGACAA TTAACTTATATATTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MNSINEASVNDGRAIPLLEDEIDIKNILYSLNRNRRLIAKFIFSGLFISGLIIFSTKRVWEGEFQIVLENNEVNRPSLLK ESGLSNVLNISGGNDSLITEVGILKSPLVLMNIFEFVKKEKEFKNNQIRNLNFKKWKESYLKIDLEKNSTILNITYKDND KDLVIPVLNKISTTYQDYSGRKRLRGLELGSNFYEEQIGIFKSRSIDSLRKSQKFANDQDLSVLPNDFKSIESASELITS SSIDLEIPNAINIEAIRVAAANKIRFIDQQLEQINKLNDQSSEQIMYIASTIPALQELSAKLKLFESDLARLRLIYKESD KNIKNLVEQRNFSIELLKRQVKGFLIAQKADAQARLKSAERPAGTLIEYKMLLSNAFKDKATLDNLENEYRKLLLEKARS TDPWELITTPTLSPNPIAPKKIKILALGLIAGIFTGSVAALISDKRKDIIFSLVEIESYGFGPVLTELSFVQKQSWTESI DLVISGPLSEIKGSIAFLAVGEIDEEELMHLSKLLRKFTNSPEIIITKDLREAVQCPNLIVITALGITRNQELIEARQKL LLQRTSILGLIALT
Sequences:
>Translated_574_residues MNSINEASVNDGRAIPLLEDEIDIKNILYSLNRNRRLIAKFIFSGLFISGLIIFSTKRVWEGEFQIVLENNEVNRPSLLK ESGLSNVLNISGGNDSLITEVGILKSPLVLMNIFEFVKKEKEFKNNQIRNLNFKKWKESYLKIDLEKNSTILNITYKDND KDLVIPVLNKISTTYQDYSGRKRLRGLELGSNFYEEQIGIFKSRSIDSLRKSQKFANDQDLSVLPNDFKSIESASELITS SSIDLEIPNAINIEAIRVAAANKIRFIDQQLEQINKLNDQSSEQIMYIASTIPALQELSAKLKLFESDLARLRLIYKESD KNIKNLVEQRNFSIELLKRQVKGFLIAQKADAQARLKSAERPAGTLIEYKMLLSNAFKDKATLDNLENEYRKLLLEKARS TDPWELITTPTLSPNPIAPKKIKILALGLIAGIFTGSVAALISDKRKDIIFSLVEIESYGFGPVLTELSFVQKQSWTESI DLVISGPLSEIKGSIAFLAVGEIDEEELMHLSKLLRKFTNSPEIIITKDLREAVQCPNLIVITALGITRNQELIEARQKL LLQRTSILGLIALT >Mature_574_residues MNSINEASVNDGRAIPLLEDEIDIKNILYSLNRNRRLIAKFIFSGLFISGLIIFSTKRVWEGEFQIVLENNEVNRPSLLK ESGLSNVLNISGGNDSLITEVGILKSPLVLMNIFEFVKKEKEFKNNQIRNLNFKKWKESYLKIDLEKNSTILNITYKDND KDLVIPVLNKISTTYQDYSGRKRLRGLELGSNFYEEQIGIFKSRSIDSLRKSQKFANDQDLSVLPNDFKSIESASELITS SSIDLEIPNAINIEAIRVAAANKIRFIDQQLEQINKLNDQSSEQIMYIASTIPALQELSAKLKLFESDLARLRLIYKESD KNIKNLVEQRNFSIELLKRQVKGFLIAQKADAQARLKSAERPAGTLIEYKMLLSNAFKDKATLDNLENEYRKLLLEKARS TDPWELITTPTLSPNPIAPKKIKILALGLIAGIFTGSVAALISDKRKDIIFSLVEIESYGFGPVLTELSFVQKQSWTESI DLVISGPLSEIKGSIAFLAVGEIDEEELMHLSKLLRKFTNSPEIIITKDLREAVQCPNLIVITALGITRNQELIEARQKL LLQRTSILGLIALT
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64852; Mature: 64852
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSINEASVNDGRAIPLLEDEIDIKNILYSLNRNRRLIAKFIFSGLFISGLIIFSTKRVW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEE EGEFQIVLENNEVNRPSLLKESGLSNVLNISGGNDSLITEVGILKSPLVLMNIFEFVKKE CCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHH KEFKNNQIRNLNFKKWKESYLKIDLEKNSTILNITYKDNDKDLVIPVLNKISTTYQDYSG HHHCCCCCCCCCHHHHHCCCEEEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHCCC RKRLRGLELGSNFYEEQIGIFKSRSIDSLRKSQKFANDQDLSVLPNDFKSIESASELITS HHHHCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC SSIDLEIPNAINIEAIRVAAANKIRFIDQQLEQINKLNDQSSEQIMYIASTIPALQELSA CCCCEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH KLKLFESDLARLRLIYKESDKNIKNLVEQRNFSIELLKRQVKGFLIAQKADAQARLKSAE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHHHHCC RPAGTLIEYKMLLSNAFKDKATLDNLENEYRKLLLEKARSTDPWELITTPTLSPNPIAPK CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC KIKILALGLIAGIFTGSVAALISDKRKDIIFSLVEIESYGFGPVLTELSFVQKQSWTESI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE DLVISGPLSEIKGSIAFLAVGEIDEEELMHLSKLLRKFTNSPEIIITKDLREAVQCPNLI EEEEECCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEE VITALGITRNQELIEARQKLLLQRTSILGLIALT EEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MNSINEASVNDGRAIPLLEDEIDIKNILYSLNRNRRLIAKFIFSGLFISGLIIFSTKRVW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEE EGEFQIVLENNEVNRPSLLKESGLSNVLNISGGNDSLITEVGILKSPLVLMNIFEFVKKE CCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHH KEFKNNQIRNLNFKKWKESYLKIDLEKNSTILNITYKDNDKDLVIPVLNKISTTYQDYSG HHHCCCCCCCCCHHHHHCCCEEEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHCCC RKRLRGLELGSNFYEEQIGIFKSRSIDSLRKSQKFANDQDLSVLPNDFKSIESASELITS HHHHCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC SSIDLEIPNAINIEAIRVAAANKIRFIDQQLEQINKLNDQSSEQIMYIASTIPALQELSA CCCCEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH KLKLFESDLARLRLIYKESDKNIKNLVEQRNFSIELLKRQVKGFLIAQKADAQARLKSAE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHHHHCC RPAGTLIEYKMLLSNAFKDKATLDNLENEYRKLLLEKARSTDPWELITTPTLSPNPIAPK CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC KIKILALGLIAGIFTGSVAALISDKRKDIIFSLVEIESYGFGPVLTELSFVQKQSWTESI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE DLVISGPLSEIKGSIAFLAVGEIDEEELMHLSKLLRKFTNSPEIIITKDLREAVQCPNLI EEEEECCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCEE VITALGITRNQELIEARQKLLLQRTSILGLIALT EEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA