Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is hisF [H]
Identifier: 124025582
GI number: 124025582
Start: 812773
End: 813519
Strand: Direct
Name: hisF [H]
Synonym: NATL1_08751
Alternate gene names: 124025582
Gene position: 812773-813519 (Clockwise)
Preceding gene: 124025581
Following gene: 124025583
Centisome position: 43.59
GC content: 32.4
Gene sequence:
>747_bases ATGAGAATTATAGGAAGATTGGATGTAAAGAATAATCATGTTATAAAAGGGATTCACTTGGAAGGTCTTAGGAAAGTCGG AGATCCACAAGAGTTAGCAGTAGAATACTATAAACAAGGAATTGAAGAAATAGTTTTCATGGATGCAGTCGCAAGTCTAT ATAATAGAAATAATTTATTTCACATAATACAAAAGGCGTGTGAGAAAGTTTTTGTCCCAATTGCCTTAGGTGGCGGATTA AGATCCTTGGATGATGTTTCTAAAGCTTTGAACGCAGGTGCAGATAAGGTAGTTATAAATACGGCATTAGTAAATAGAAT TGATTTAGCTAAAGAAATAGCACAAAAGTATGGTTCGCAATGTTTAGTGGGTTCTATCGAAGCTAAAAGAGAAAATGATT CTTGGAGAGTTTACGTTGATAATGGTAGAGAGCCAACTAAACACAATGTAGTTGACTGGGCAATCAAACTTAAAGAAGCT GGTGTAGGAGAAATACTTCTAACATCTATTGATCAAGAAGGAACTTCAAAGGGTTTTGATATTGAACTTATAAAACAAAT AAATGAATCAATAAGATGTCCAATAATTGCAAGTGGAGGTTATGGAAATAAAAAACATCTTGCTGATTTATTAAAAATTG TTGAACCTTCTGCTATTGCTATCGCAGGCTCTTTACATTACAAGAAAGATACCGTAAGTAGTATAAAACAAGAAATTAAT TCTTTGTTTATACAAGAAAAAAAATGA
Upstream 100 bases:
>100_bases AGAAAGATCTATAGACATTGATAATGAATCAGATTTTGAAAAAGTCTCTACATTTATGAATATTTAGTTTATAGTAAAAT ATCTATAAAATAGAATTGAA
Downstream 100 bases:
>100_bases AGGTAGGTATAATTGATTATGGAGTAGGTAACTTAAGAAGTATTTCTAATGCTCTTAATGAAATAGGAGCTGAAAATATA GTATCAAGCAATAAGAAAGA
Product: imidazole glycerol-phosphate synthase
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase cyclase subunit; IGP synthase subunit hisF; ImGP synthase subunit hisF; IGPS subunit hisF [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLFHIIQKACEKVFVPIALGGGL RSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQCLVGSIEAKRENDSWRVYVDNGREPTKHNVVDWAIKLKEA GVGEILLTSIDQEGTSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSSIKQEIN SLFIQEKK
Sequences:
>Translated_248_residues MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLFHIIQKACEKVFVPIALGGGL RSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQCLVGSIEAKRENDSWRVYVDNGREPTKHNVVDWAIKLKEA GVGEILLTSIDQEGTSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSSIKQEIN SLFIQEKK >Mature_248_residues MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLFHIIQKACEKVFVPIALGGGL RSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQCLVGSIEAKRENDSWRVYVDNGREPTKHNVVDWAIKLKEA GVGEILLTSIDQEGTSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSSIKQEIN SLFIQEKK
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the hisH subunit [H]
COG id: COG0107
COG function: function code E; Imidazoleglycerol-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI1788336, Length=234, Percent_Identity=31.6239316239316, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI87082028, Length=187, Percent_Identity=26.7379679144385, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319725, Length=300, Percent_Identity=28.6666666666667, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 4.1.3.- [C]
Molecular weight: Translated: 27417; Mature: 27417
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLF CCEEEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HIIQKACEKVFVPIALGGGLRSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQ HHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCE CLVGSIEAKRENDSWRVYVDNGREPTKHNVVDWAIKLKEAGVGEILLTSIDQEGTSKGFD EEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHEECCCCCCCCEEEEECCCCCCCCCCC IELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSSIKQEIN HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH SLFIQEKK HHHHCCCC >Mature Secondary Structure MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLF CCEEEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HIIQKACEKVFVPIALGGGLRSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQ HHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCE CLVGSIEAKRENDSWRVYVDNGREPTKHNVVDWAIKLKEAGVGEILLTSIDQEGTSKGFD EEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHEECCCCCCCCEEEEECCCCCCCCCCC IELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSSIKQEIN HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH SLFIQEKK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Lyases; Carbon-Nitrogen Lyases; Amidine-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11043980 [H]