| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is pgsA [H]
Identifier: 124025545
GI number: 124025545
Start: 770484
End: 771056
Strand: Reverse
Name: pgsA [H]
Synonym: NATL1_08381
Alternate gene names: 124025545
Gene position: 771056-770484 (Counterclockwise)
Preceding gene: 124025547
Following gene: 124025543
Centisome position: 41.35
GC content: 31.76
Gene sequence:
>573_bases ATGAACAAAAGAATTATGAACGCAAAAAGATTTATGACTTGGCCGAGAATTATAAATGGACTTACAGTTTCAAGGATATT ACTTGGATTACCAATAATTATTTCACTGAAAAATGATAATAATGAAGTTTTTATTTTTCTAATCCTGATAGCTGGTCTTA CTGATTATCTAGACGGGTATTTTGCACGTAAATATGATCATAAATCTGCTTTTGGCGCAAAGCTTGATCCTCTAGCAGAC AAAATCCTTCTTATTGGTCCAATGATTTGGTTGGTTCATGAGAATCTAGTGCCGTTATGGGCTATATGGTTAATAATATC GAGAGAATTGTTAATAACTAGTTGGCGATCAGGTAAAACCTCAGGTGGTCCAGCTTCAATTCAGGGTAAATATAAAACTA CATTTCAGTTTGCAAGTATAATTCTATTATTATGGCCAAAAAACTGGGGTACAATTTATACAATCAATATTATTAATAAA ATAGGCTATTTCTCATTCTGGATAGCATTGTTTCTTACTTTAAGTTCTGCTATCAAGTATATACTCAATCAAAAAGAAGC TCATCAGAACTAA
Upstream 100 bases:
>100_bases ATGATTTTTCTCTATTAAGTCTGATTATAATATAATAGCTTCCTTATAGGCTATGCTTTAGTATTTTTAAACAATTTAAC TACATAAGATTTTAGATGAA
Downstream 100 bases:
>100_bases AATCAACTTGTTCGTGATTAGCTAATAAATAATCATTCTTATAGCTATCAATTAAACCATTTAACAAATCGAATTTGGGC TCCCAAGATAAATCTTTTTC
Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNKRIMNAKRFMTWPRIINGLTVSRILLGLPIIISLKNDNNEVFIFLILIAGLTDYLDGYFARKYDHKSAFGAKLDPLAD KILLIGPMIWLVHENLVPLWAIWLIISRELLITSWRSGKTSGGPASIQGKYKTTFQFASIILLLWPKNWGTIYTINIINK IGYFSFWIALFLTLSSAIKYILNQKEAHQN
Sequences:
>Translated_190_residues MNKRIMNAKRFMTWPRIINGLTVSRILLGLPIIISLKNDNNEVFIFLILIAGLTDYLDGYFARKYDHKSAFGAKLDPLAD KILLIGPMIWLVHENLVPLWAIWLIISRELLITSWRSGKTSGGPASIQGKYKTTFQFASIILLLWPKNWGTIYTINIINK IGYFSFWIALFLTLSSAIKYILNQKEAHQN >Mature_190_residues MNKRIMNAKRFMTWPRIINGLTVSRILLGLPIIISLKNDNNEVFIFLILIAGLTDYLDGYFARKYDHKSAFGAKLDPLAD KILLIGPMIWLVHENLVPLWAIWLIISRELLITSWRSGKTSGGPASIQGKYKTTFQFASIILLLWPKNWGTIYTINIINK IGYFSFWIALFLTLSSAIKYILNQKEAHQN
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=144, Percent_Identity=34.7222222222222, Blast_Score=71, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21815; Mature: 21815
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRIMNAKRFMTWPRIINGLTVSRILLGLPIIISLKNDNNEVFIFLILIAGLTDYLDGY CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHH FARKYDHKSAFGAKLDPLADKILLIGPMIWLVHENLVPLWAIWLIISRELLITSWRSGKT HHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCC SGGPASIQGKYKTTFQFASIILLLWPKNWGTIYTINIINKIGYFSFWIALFLTLSSAIKY CCCCCCCCCCHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILNQKEAHQN HHHHHHCCCC >Mature Secondary Structure MNKRIMNAKRFMTWPRIINGLTVSRILLGLPIIISLKNDNNEVFIFLILIAGLTDYLDGY CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHH FARKYDHKSAFGAKLDPLADKILLIGPMIWLVHENLVPLWAIWLIISRELLITSWRSGKT HHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCC SGGPASIQGKYKTTFQFASIILLLWPKNWGTIYTINIINKIGYFSFWIALFLTLSSAIKY CCCCCCCCCCHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILNQKEAHQN HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA