| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is hisA
Identifier: 124025543
GI number: 124025543
Start: 768731
End: 769501
Strand: Reverse
Name: hisA
Synonym: NATL1_08361
Alternate gene names: 124025543
Gene position: 769501-768731 (Counterclockwise)
Preceding gene: 124025545
Following gene: 124025542
Centisome position: 41.27
GC content: 36.06
Gene sequence:
>771_bases ATGGAAATCATACCTGCAATAGATCTACTGAATGGTAAATGTGTTCGACTAAATCAAGGAAATTATAATGAAGTTACTAA GTTCAATAGTGATCCTGTAAAACAAGCACAAATTTGGGAAAGCAAGGGAGCAAAACGACTACATCTTGTAGATCTTGATG GTGCTAAGACAGGTGAGCCCATAAATGATCTAACTATAAAAGAGATAAAAAAATCTATTACAATACCTATTCAACTTGGC GGTGGAATTAGGAGTATTGATCGTGCGAAAGAATTATTCGACATTGGAATAGACAGAATTATTTTAGGAACAATTGCAAT AGAGAAGCCCGAATTAGTTAAAGACCTATCTAAAGAATATCCAAAAAGAGTTGCAGTAGGAATTGATGCCAAAGAGGGAA TGGTAGCCACTCGAGGTTGGTTAAAACAAAGCAAAATATCTTCTCTAGACTTAGCAAAACAACTTAACGATCTTGACTTA GCGGCAATCATATCAACTGACATTGCTACCGATGGCACTCTAAAAGGACCTAATGTTCAAGCCTTGAGAGAAATAGCTGA GATAAGTATTAATCCAGTAATTGCCTCAGGGGGGATAGGTTCAATAGCTGATTTAATTTCACTAGCAGATTTCGCGGATG AAGGTATTGAAGGAATAATCGTAGGCAGAGCCCTATATGACGGCTCAATAGATTTAAAGGAAGCGATTTTAACTCTAAAA AATCTTCTTCTGCAAGATGCTTTCAATGAGAAAGATAAATTTCTTGTCTAA
Upstream 100 bases:
>100_bases CTTTCAAGATCATTTATTAAAAAAATTATATTAAAGCCTATAGATAATCTCCCAGAGCTACATAAATGATGTTAGATGAA TAGTAATAATTTTTTTCTTG
Downstream 100 bases:
>100_bases CATTTAAAAAAATGTTCAATCCTTTGGATTTTGGAAATAGGGCTGGAAGTATTTTTAAATCAAGTTATCTTAAAAAGGAT AGGTTCTAGATTTAAAATTG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEIIPAIDLLNGKCVRLNQGNYNEVTKFNSDPVKQAQIWESKGAKRLHLVDLDGAKTGEPINDLTIKEIKKSITIPIQLG GGIRSIDRAKELFDIGIDRIILGTIAIEKPELVKDLSKEYPKRVAVGIDAKEGMVATRGWLKQSKISSLDLAKQLNDLDL AAIISTDIATDGTLKGPNVQALREIAEISINPVIASGGIGSIADLISLADFADEGIEGIIVGRALYDGSIDLKEAILTLK NLLLQDAFNEKDKFLV
Sequences:
>Translated_256_residues MEIIPAIDLLNGKCVRLNQGNYNEVTKFNSDPVKQAQIWESKGAKRLHLVDLDGAKTGEPINDLTIKEIKKSITIPIQLG GGIRSIDRAKELFDIGIDRIILGTIAIEKPELVKDLSKEYPKRVAVGIDAKEGMVATRGWLKQSKISSLDLAKQLNDLDL AAIISTDIATDGTLKGPNVQALREIAEISINPVIASGGIGSIADLISLADFADEGIEGIIVGRALYDGSIDLKEAILTLK NLLLQDAFNEKDKFLV >Mature_256_residues MEIIPAIDLLNGKCVRLNQGNYNEVTKFNSDPVKQAQIWESKGAKRLHLVDLDGAKTGEPINDLTIKEIKKSITIPIQLG GGIRSIDRAKELFDIGIDRIILGTIAIEKPELVKDLSKEYPKRVAVGIDAKEGMVATRGWLKQSKISSLDLAKQLNDLDL AAIISTDIATDGTLKGPNVQALREIAEISINPVIASGGIGSIADLISLADFADEGIEGIIVGRALYDGSIDLKEAILTLK NLLLQDAFNEKDKFLV
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=248, Percent_Identity=35.0806451612903, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1788336, Length=243, Percent_Identity=23.8683127572016, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_PROM1 (A2C1N4)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014659.1 - ProteinModelPortal: A2C1N4 - SMR: A2C1N4 - STRING: A2C1N4 - GeneID: 4780472 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_08361 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: PMAR167555:NATL1_08361-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 27721; Mature: 27721
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIPAIDLLNGKCVRLNQGNYNEVTKFNSDPVKQAQIWESKGAKRLHLVDLDGAKTGEP CCCCCCEECCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC INDLTIKEIKKSITIPIQLGGGIRSIDRAKELFDIGIDRIILGTIAIEKPELVKDLSKEY CCHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHC PKRVAVGIDAKEGMVATRGWLKQSKISSLDLAKQLNDLDLAAIISTDIATDGTLKGPNVQ CHHEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHH ALREIAEISINPVIASGGIGSIADLISLADFADEGIEGIIVGRALYDGSIDLKEAILTLK HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH NLLLQDAFNEKDKFLV HHHHHHHCCCCCCCCC >Mature Secondary Structure MEIIPAIDLLNGKCVRLNQGNYNEVTKFNSDPVKQAQIWESKGAKRLHLVDLDGAKTGEP CCCCCCEECCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC INDLTIKEIKKSITIPIQLGGGIRSIDRAKELFDIGIDRIILGTIAIEKPELVKDLSKEY CCHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHC PKRVAVGIDAKEGMVATRGWLKQSKISSLDLAKQLNDLDLAAIISTDIATDGTLKGPNVQ CHHEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHH ALREIAEISINPVIASGGIGSIADLISLADFADEGIEGIIVGRALYDGSIDLKEAILTLK HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH NLLLQDAFNEKDKFLV HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA