| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025492
Identifier: 124025492
GI number: 124025492
Start: 717451
End: 718626
Strand: Direct
Name: 124025492
Synonym: NATL1_07851
Alternate gene names: NA
Gene position: 717451-718626 (Clockwise)
Preceding gene: 124025491
Following gene: 124025493
Centisome position: 38.47
GC content: 34.78
Gene sequence:
>1176_bases GTGGAATTAAAAAATATTTTTAAAAAAAGGAAAATACCTCTTGCTTGGCTTTTGCTGACAAGACAACCTTTAAGAATATT GGTAGCCATTGCAGGGATAGCATTTGCTGGAATCTTGATGTTTATGCAATTAGGTTTCAGAGATGGTTTGTTTGATGCGA GTGTTACTGTTCATAAGTTGTTTGACGCAGATTTGGTATTAATTAGTCCTCGCTCAAAAAGTTCAATAAGTATGAGTGGG TTTCCTCGACGAAGATTAGTTCAAGCAATGGCACATAAGGATGTGACTGGAACAACTGCGGTTAATTGGAATTTTTTGCT TTGGCGAAACCCAGAAAATTTATCAACTAGATCAATTCTTGCTTTAGGCTTTGAGCCAAGTAATCCATTGTTGATTGATT CTGATTTTGAGAGAAAGGCTAAAACTTTAAAAAACAAAGGTAGGGTTTTATTTGATGATCTTTCCAGAGATGAATTCGGA CCTATATCGCCATGGTTCAAATCAGGACGTGTAGTTGAAACTGAAGTCGCAGGTAAAAGAGTTAGAGTTTCTGGGATAGT TAGTCTAGGTCCTTCCTTTGGCGCAGATGGGAATTTAATTACTAGCAGTGAGACATACTTAGAATTATCTCCAGGTAATC CTAAAGGAAGTATTGAAATTGGTTTAGTAAGATTAGCGAAGGGATCTGATATTGAAAAAGTTGTGCGCTCTTTAAATATA AGTTTGCCTAGTGACGTTAAGGTTATGTCTTTGAAATCATTTATAGATTTTGAAAAAAATTATTGGAAAAGTAGTACATC CATTGGATTCATTTTTACATTGGGAGCAGCAATGGGATTTATTGTTGGTTGTGTAATTGTTTATCAAATTCTTTACAGTG ATGTCAGTGATCATTTACCTGAATATGCAACCTTAATGGCTATGGGTTACAACTTAAGAACCCTATTAGGAGTTGTAGCT AGAGAAGGATTCATTTTATCAATAATGGGATATATTCCTGCTTATGTTGCAGGACAAGCTTTATATGCTTTGGTTAGATC TTCAACTAAATTACCTGTTGAAATGAGTTTTAGTAGAGCATCAATTATATTTTGCTTGATACTTTTTATGTGTATGGGAT CAGCATTAGCAGCTATGAAAAAATTGGCAGATGCTGATCCTGCTGAAATATTTTGA
Upstream 100 bases:
>100_bases ACTCAAGGGTTGTTGAGGTTCGAGTCAAGCTTGATAATTCATCAGCCAAAAAGGTCTCTCATCTAACTGGAATGAAAGTC ATTGCTCGTTTTCAGCCGTA
Downstream 100 bases:
>100_bases TGAATAAATTAATGTTTTAAATTTAAATTAATTATGAAAAATATAAACAATAAAACTTTAAATATTTCTTCTTTGAATCA TTGGTATGGGCATGGAGAGA
Product: ABC-transporter, membrane spanning component
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MELKNIFKKRKIPLAWLLLTRQPLRILVAIAGIAFAGILMFMQLGFRDGLFDASVTVHKLFDADLVLISPRSKSSISMSG FPRRRLVQAMAHKDVTGTTAVNWNFLLWRNPENLSTRSILALGFEPSNPLLIDSDFERKAKTLKNKGRVLFDDLSRDEFG PISPWFKSGRVVETEVAGKRVRVSGIVSLGPSFGADGNLITSSETYLELSPGNPKGSIEIGLVRLAKGSDIEKVVRSLNI SLPSDVKVMSLKSFIDFEKNYWKSSTSIGFIFTLGAAMGFIVGCVIVYQILYSDVSDHLPEYATLMAMGYNLRTLLGVVA REGFILSIMGYIPAYVAGQALYALVRSSTKLPVEMSFSRASIIFCLILFMCMGSALAAMKKLADADPAEIF
Sequences:
>Translated_391_residues MELKNIFKKRKIPLAWLLLTRQPLRILVAIAGIAFAGILMFMQLGFRDGLFDASVTVHKLFDADLVLISPRSKSSISMSG FPRRRLVQAMAHKDVTGTTAVNWNFLLWRNPENLSTRSILALGFEPSNPLLIDSDFERKAKTLKNKGRVLFDDLSRDEFG PISPWFKSGRVVETEVAGKRVRVSGIVSLGPSFGADGNLITSSETYLELSPGNPKGSIEIGLVRLAKGSDIEKVVRSLNI SLPSDVKVMSLKSFIDFEKNYWKSSTSIGFIFTLGAAMGFIVGCVIVYQILYSDVSDHLPEYATLMAMGYNLRTLLGVVA REGFILSIMGYIPAYVAGQALYALVRSSTKLPVEMSFSRASIIFCLILFMCMGSALAAMKKLADADPAEIF >Mature_391_residues MELKNIFKKRKIPLAWLLLTRQPLRILVAIAGIAFAGILMFMQLGFRDGLFDASVTVHKLFDADLVLISPRSKSSISMSG FPRRRLVQAMAHKDVTGTTAVNWNFLLWRNPENLSTRSILALGFEPSNPLLIDSDFERKAKTLKNKGRVLFDDLSRDEFG PISPWFKSGRVVETEVAGKRVRVSGIVSLGPSFGADGNLITSSETYLELSPGNPKGSIEIGLVRLAKGSDIEKVVRSLNI SLPSDVKVMSLKSFIDFEKNYWKSSTSIGFIFTLGAAMGFIVGCVIVYQILYSDVSDHLPEYATLMAMGYNLRTLLGVVA REGFILSIMGYIPAYVAGQALYALVRSSTKLPVEMSFSRASIIFCLILFMCMGSALAAMKKLADADPAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43063; Mature: 43063
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKNIFKKRKIPLAWLLLTRQPLRILVAIAGIAFAGILMFMQLGFRDGLFDASVTVHKL CCHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FDADLVLISPRSKSSISMSGFPRRRLVQAMAHKDVTGTTAVNWNFLLWRNPENLSTRSIL CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEE ALGFEPSNPLLIDSDFERKAKTLKNKGRVLFDDLSRDEFGPISPWFKSGRVVETEVAGKR EEECCCCCCEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHCCCEEEEECCCCE VRVSGIVSLGPSFGADGNLITSSETYLELSPGNPKGSIEIGLVRLAKGSDIEKVVRSLNI EEEEEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHCC SLPSDVKVMSLKSFIDFEKNYWKSSTSIGFIFTLGAAMGFIVGCVIVYQILYSDVSDHLP CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYATLMAMGYNLRTLLGVVAREGFILSIMGYIPAYVAGQALYALVRSSTKLPVEMSFSRA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHH SIIFCLILFMCMGSALAAMKKLADADPAEIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MELKNIFKKRKIPLAWLLLTRQPLRILVAIAGIAFAGILMFMQLGFRDGLFDASVTVHKL CCHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FDADLVLISPRSKSSISMSGFPRRRLVQAMAHKDVTGTTAVNWNFLLWRNPENLSTRSIL CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEE ALGFEPSNPLLIDSDFERKAKTLKNKGRVLFDDLSRDEFGPISPWFKSGRVVETEVAGKR EEECCCCCCEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHCCCEEEEECCCCE VRVSGIVSLGPSFGADGNLITSSETYLELSPGNPKGSIEIGLVRLAKGSDIEKVVRSLNI EEEEEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHCC SLPSDVKVMSLKSFIDFEKNYWKSSTSIGFIFTLGAAMGFIVGCVIVYQILYSDVSDHLP CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYATLMAMGYNLRTLLGVVAREGFILSIMGYIPAYVAGQALYALVRSSTKLPVEMSFSRA HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHH SIIFCLILFMCMGSALAAMKKLADADPAEIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA