| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025470
Identifier: 124025470
GI number: 124025470
Start: 698115
End: 698672
Strand: Direct
Name: 124025470
Synonym: NATL1_07631
Alternate gene names: NA
Gene position: 698115-698672 (Clockwise)
Preceding gene: 124025469
Following gene: 124025472
Centisome position: 37.44
GC content: 33.15
Gene sequence:
>558_bases TTGCTCAATTCAATCTTCTATAAATCCGTATTTAAAGACTTTGCTTTTCTAATTTTGAGAGTATTTACGGGTGCACTTTT AATTCACCATGGATTTGAAAAGTTAAATGACATCAACAATTTTGCTGATGCTTTTGTACGTCCTCTTCACTTACCATTTC CAGTCACCCTCTCTTACATTGCCGCAGGATCTGAGATAGGTGGTAGTTGGTTATTGATACTTGGTCTTGGTACGAGACTA GGAGCATCAGCAATTCTAGGGACCATGAGTGTTGCCATTTATCACGCAATCGTTACTTCAGGTTTTAACATTTATCTATT AGAACTCTTAGCTCTTTATTTTAGTTCTGCGTTTTCAATTATTTTGTTGGGACCAGGTATGTTCTCCGCTGACTACCTTA TTAATGAAATTTTTAAATCCAATCCTGATTTTATTTTTTCAATTTTTACTCAACAACAATCAAATGAAACTGAATCATTT TCAAAAAGTGAATCACTTAAATCTATAAAACAAAAGAGATCATTTGATTTTCCCTTTACTAACTTCTTATCTTCTTGA
Upstream 100 bases:
>100_bases CGCCATAAGTAATATTACTCATCGTAATAGGCTTGCCTTTTCGTTTCCACGCTTGATGCACTTACATATCTAAAGTTCAA TTCAATTGTTCTAGGTTAAA
Downstream 100 bases:
>100_bases CCATATTAGATTTATTTTTTATCTGTATCTTTTTTCTTCATTGATAAGTAGAACCACATCCATGTAGGTAAAGTAATGAA AAAACCAATTAGTATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MLNSIFYKSVFKDFAFLILRVFTGALLIHHGFEKLNDINNFADAFVRPLHLPFPVTLSYIAAGSEIGGSWLLILGLGTRL GASAILGTMSVAIYHAIVTSGFNIYLLELLALYFSSAFSIILLGPGMFSADYLINEIFKSNPDFIFSIFTQQQSNETESF SKSESLKSIKQKRSFDFPFTNFLSS
Sequences:
>Translated_185_residues MLNSIFYKSVFKDFAFLILRVFTGALLIHHGFEKLNDINNFADAFVRPLHLPFPVTLSYIAAGSEIGGSWLLILGLGTRL GASAILGTMSVAIYHAIVTSGFNIYLLELLALYFSSAFSIILLGPGMFSADYLINEIFKSNPDFIFSIFTQQQSNETESF SKSESLKSIKQKRSFDFPFTNFLSS >Mature_185_residues MLNSIFYKSVFKDFAFLILRVFTGALLIHHGFEKLNDINNFADAFVRPLHLPFPVTLSYIAAGSEIGGSWLLILGLGTRL GASAILGTMSVAIYHAIVTSGFNIYLLELLALYFSSAFSIILLGPGMFSADYLINEIFKSNPDFIFSIFTQQQSNETESF SKSESLKSIKQKRSFDFPFTNFLSS
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20611; Mature: 20611
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSIFYKSVFKDFAFLILRVFTGALLIHHGFEKLNDINNFADAFVRPLHLPFPVTLSYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAGSEIGGSWLLILGLGTRLGASAILGTMSVAIYHAIVTSGFNIYLLELLALYFSSAFSI HCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE ILLGPGMFSADYLINEIFKSNPDFIFSIFTQQQSNETESFSKSESLKSIKQKRSFDFPFT EEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH NFLSS HHHCC >Mature Secondary Structure MLNSIFYKSVFKDFAFLILRVFTGALLIHHGFEKLNDINNFADAFVRPLHLPFPVTLSYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAGSEIGGSWLLILGLGTRLGASAILGTMSVAIYHAIVTSGFNIYLLELLALYFSSAFSI HCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEE ILLGPGMFSADYLINEIFKSNPDFIFSIFTQQQSNETESFSKSESLKSIKQKRSFDFPFT EEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH NFLSS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA