Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is ytfP [H]

Identifier: 124025469

GI number: 124025469

Start: 696437

End: 697660

Strand: Direct

Name: ytfP [H]

Synonym: NATL1_07621

Alternate gene names: 124025469

Gene position: 696437-697660 (Clockwise)

Preceding gene: 124025464

Following gene: 124025470

Centisome position: 37.35

GC content: 33.25

Gene sequence:

>1224_bases
ATGATTTCAGATCTTGTCATTATTGGAGGGGGTGCCTCTGGCTTTATGGCAGCAATCACCGCGATTACTAATGGACTTAG
ATCAGTTGTGATTCTAGAAGGTGCCTCAAAAGTACTTGAAAAAGTTAGAATTAGTGGTGGTGGTAGATGTAATTTAACCA
ACTCATGTTTCGAGATTTCTGATTTAGTAAACAATTATCCAAGAGGTGAAAAGCAACTATTAGGATTGTTTAATAGATTT
TCTACAACTGAAGCTTTTGATTGGTTTCAGGAGAAAGGACTTAGTCTTAAAGTAGAGAAAGATGGCAGAGTATTTCCTTG
CTCTGATTCTTCTGAAGAAGTTATAAGTTGTTTGACTAATGTTGCGAAAAACTCAGGTGTAAAGGTATTAACTAATTCTT
ATGTAAAGCAAATAAGTAAAATAGAAGGTGGCTTTAACTTATTAGTCAAAGGAGACAATTCCTTTAAAGCTAAGAATATT
TTAATTTGTACTGGTGGTCATTCTAGTGGACGTAGATTAGCAATGAGTCTAGGGCACTCTATTATTCATCCTGTGCCCTC
TCTTTTTTCTTTTTCTACTGTAGATAGCTCATTAAAAGATTGCTCAGGTATTACTTTAGATGTTCAAGTCAAACTCAATG
TTAACAATAAAAAATATTTTGAAAAAGGTCCTATCTTGATAACTCATAAAGGCTTTAGCGGCCCTGTCATCCTTAGACTA
TCTGCATTTAGTGCTAGAAATCTATACGATAATAAATACAAAGCTGAATTAAGAATAAATTGGCTTTGTATGAATGAGAA
TGAAGCCAGATTGAAAATTGATTTATATAAATTAGAAAATGGTAAGAAATTAGTGTTCAATTATAAACCTTTCGATAAAC
TTCCACGAAGCTTATGGAAATCTTTTCTCTTAAGCCTAAATATTGACTCACAATTGAAATGGGCTGAGCTATCTAAAACC
AAAAAAGAGTCTTTAATCAAATATTTAATAATGAAAACCTATCTTATTAAGGGTCGTGGTCCTTTTGGTGAGGAATTTGT
AACTGCTGGAGGAGTATCACTTAAGGAAATTAATTTTAAAACTATGGAAAGTAAGATAACTAAGGGGGTATTCTTCGCTG
GAGAAGTATTAGATATTGATGGTGTTACAGGTGGTTTTAATTTCCAGCATTGTTGGACAAGTGGCTGGGTAGCAGGGAAA
TCAATAGTTGTTAAGTATTCATAA

Upstream 100 bases:

>100_bases
TTTTTTAAGATTTAGTTTTGACTCAATAAATAAAAGTAATAAATAATTTATTTATTTATTACTTTTATTAAAATCTAAAT
TATTAGAAGTTTATTCTTTT

Downstream 100 bases:

>100_bases
CTTGAAGCAATATTTACAAATTTTTAATATTGAATATCTTAAAAAAATTGAATATGTGTAGATTTAATTTTAGCCAAGTG
AAGCGATTAGTGCTGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF
STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI
LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL
SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT
KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK
SIVVKYS

Sequences:

>Translated_407_residues
MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF
STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI
LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL
SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT
KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK
SIVVKYS
>Mature_407_residues
MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF
STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI
LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL
SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT
KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK
SIVVKYS

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=401, Percent_Identity=25.9351620947631, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45004; Mature: 45004

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEIS
CCCCEEEEECCCHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHH
DLVNNYPRGEKQLLGLFNRFSTTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTN
HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH
VAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNILICTGGHSSGRRLAMSLGHS
HHHCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCH
IIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL
HHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCCEEEEE
SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWK
ECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHH
SFLLSLNIDSQLKWAELSKTKKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFK
HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEEECCHH
TMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGKSIVVKYS
HHHHHHHCCEEEECEEEEECCCCCCCCCCEEECCCEEECCEEEEEEC
>Mature Secondary Structure
MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEIS
CCCCEEEEECCCHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHH
DLVNNYPRGEKQLLGLFNRFSTTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTN
HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH
VAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNILICTGGHSSGRRLAMSLGHS
HHHCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCH
IIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL
HHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCCEEEEE
SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWK
ECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHH
SFLLSLNIDSQLKWAELSKTKKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFK
HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEEECCHH
TMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGKSIVVKYS
HHHHHHHCCEEEECEEEEECCCCCCCCCCEEECCCEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]