Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is cbiX [H]
Identifier: 124025417
GI number: 124025417
Start: 653007
End: 654020
Strand: Direct
Name: cbiX [H]
Synonym: NATL1_07101
Alternate gene names: 124025417
Gene position: 653007-654020 (Clockwise)
Preceding gene: 124025415
Following gene: 124025418
Centisome position: 35.02
GC content: 36.49
Gene sequence:
>1014_bases TTGATTTCCCCTGCATCAATTAACTATAAATATCCATCTAATATTGGAATTTTGTTATGCGGACATGGTAGTAGAGATCC CCAAGCAGTAAAAGAGTTTATAAATGTAGTAAATAAAATAAAATCTAGAATACCTGATATCCCAGTTGAATTCGGTTTTC TAGAATTTAATCGACCAATAATTAGTGAGGCCCTAGATCAGCTTAGGGATTTGGGAGTTGAGAGAGTGATTGCTTTACCA GCTATGTTATTTGCTGCCGGGCATACTAAAAATGATATCCCTGCGGTTTTGAATAAATACTCCGCTGATAATGGACTTCT AATTCAATATGGCAGGGAGCTTGGTTTGAATTCTTTGATGATTGGAGCAGCAGGAGCAAGAATCAAAGAAACAATTGATA GTAATCCAATATTTCCTCTTCATGAAACATTACTTGTCGTCGCAGGTAGGGGATCGTCCGATCCAGATGCTAATTCAAAT GTATGTAAGATTACAAGGATGCTTGTTGAGGGATTTGGTTTTGGATGGGGAGAAACTGTTTTTTCAGGAGTAACATTTCC CCTTGTTGATCCTGGCTTGAGACATGCTCTCAAATTAGGTTTTAAAAGAGTAATTCTCTTACCTTATTTTCTTTTTTCTG GAGTTTTAGTCAGTCGCGTTAGAGAACATTCTACGAGAGTTGCAAATGATAATCCTGATGTGAAGTTTCTAAACGCAAGT TACTTATCAGACCAAGATTTAGTCATTGATACTTTTATGGAAAGAATTCAAGAAGTTTTTGATGGTGAGAATTTTATGAA CTGTGCTTTATGTAAATATCGTTCTAATTTATTAGGTTTTGAAAGCGAGGTTGGATATGAGCAGATCAGTCATCATGATC ATGTTGAAGGTTGTCTAGACATTCGCCGAGAAAACAAAGAGCATAATCACGAGCATGAACATTTTCCTTATCCACATGCA AAGCATCCTTTAGGACCTGTCACGCTTCCCTCTTTAAACAAAAGCCAAATCTAA
Upstream 100 bases:
>100_bases TTGAATTTCTAATAATCTGCTCCTTTTTCTATAATGAATATCTTAAGTTGGTATTTTATAAAACTATATTCAATTAAAGT AGATTATTGGCTAAAACATT
Downstream 100 bases:
>100_bases AAAAAATAGGTTTAAATTAGAGAATCATTTGTCTCTTTCTTGCTTGTGACGCAAGGGACTCGTTATTTATACATTTTTTT AATGTTTAGTTTCAGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: CbiXL [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MISPASINYKYPSNIGILLCGHGSRDPQAVKEFINVVNKIKSRIPDIPVEFGFLEFNRPIISEALDQLRDLGVERVIALP AMLFAAGHTKNDIPAVLNKYSADNGLLIQYGRELGLNSLMIGAAGARIKETIDSNPIFPLHETLLVVAGRGSSDPDANSN VCKITRMLVEGFGFGWGETVFSGVTFPLVDPGLRHALKLGFKRVILLPYFLFSGVLVSRVREHSTRVANDNPDVKFLNAS YLSDQDLVIDTFMERIQEVFDGENFMNCALCKYRSNLLGFESEVGYEQISHHDHVEGCLDIRRENKEHNHEHEHFPYPHA KHPLGPVTLPSLNKSQI
Sequences:
>Translated_337_residues MISPASINYKYPSNIGILLCGHGSRDPQAVKEFINVVNKIKSRIPDIPVEFGFLEFNRPIISEALDQLRDLGVERVIALP AMLFAAGHTKNDIPAVLNKYSADNGLLIQYGRELGLNSLMIGAAGARIKETIDSNPIFPLHETLLVVAGRGSSDPDANSN VCKITRMLVEGFGFGWGETVFSGVTFPLVDPGLRHALKLGFKRVILLPYFLFSGVLVSRVREHSTRVANDNPDVKFLNAS YLSDQDLVIDTFMERIQEVFDGENFMNCALCKYRSNLLGFESEVGYEQISHHDHVEGCLDIRRENKEHNHEHEHFPYPHA KHPLGPVTLPSLNKSQI >Mature_337_residues MISPASINYKYPSNIGILLCGHGSRDPQAVKEFINVVNKIKSRIPDIPVEFGFLEFNRPIISEALDQLRDLGVERVIALP AMLFAAGHTKNDIPAVLNKYSADNGLLIQYGRELGLNSLMIGAAGARIKETIDSNPIFPLHETLLVVAGRGSSDPDANSN VCKITRMLVEGFGFGWGETVFSGVTFPLVDPGLRHALKLGFKRVILLPYFLFSGVLVSRVREHSTRVANDNPDVKFLNAS YLSDQDLVIDTFMERIQEVFDGENFMNCALCKYRSNLLGFESEVGYEQISHHDHVEGCLDIRRENKEHNHEHEHFPYPHA KHPLGPVTLPSLNKSQI
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXL subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002762 [H]
Pfam domain/function: PF01903 CbiX [H]
EC number: =4.99.1.3 [H]
Molecular weight: Translated: 37588; Mature: 37588
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPASINYKYPSNIGILLCGHGSRDPQAVKEFINVVNKIKSRIPDIPVEFGFLEFNRPI CCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECEEECCCHH ISEALDQLRDLGVERVIALPAMLFAAGHTKNDIPAVLNKYSADNGLLIQYGRELGLNSLM HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHCCCCCEE IGAAGARIKETIDSNPIFPLHETLLVVAGRGSSDPDANSNVCKITRMLVEGFGFGWGETV EECCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH FSGVTFPLVDPGLRHALKLGFKRVILLPYFLFSGVLVSRVREHSTRVANDNPDVKFLNAS HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHH YLSDQDLVIDTFMERIQEVFDGENFMNCALCKYRSNLLGFESEVGYEQISHHDHVEGCLD HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHH IRRENKEHNHEHEHFPYPHAKHPLGPVTLPSLNKSQI HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISPASINYKYPSNIGILLCGHGSRDPQAVKEFINVVNKIKSRIPDIPVEFGFLEFNRPI CCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECEEECCCHH ISEALDQLRDLGVERVIALPAMLFAAGHTKNDIPAVLNKYSADNGLLIQYGRELGLNSLM HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHCCCCCEE IGAAGARIKETIDSNPIFPLHETLLVVAGRGSSDPDANSNVCKITRMLVEGFGFGWGETV EECCCCHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH FSGVTFPLVDPGLRHALKLGFKRVILLPYFLFSGVLVSRVREHSTRVANDNPDVKFLNAS HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHH YLSDQDLVIDTFMERIQEVFDGENFMNCALCKYRSNLLGFESEVGYEQISHHDHVEGCLD HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHH IRRENKEHNHEHEHFPYPHAKHPLGPVTLPSLNKSQI HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9742225; 12917443 [H]