Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is metA [H]
Identifier: 124025415
GI number: 124025415
Start: 650713
End: 651606
Strand: Direct
Name: metA [H]
Synonym: NATL1_07081
Alternate gene names: 124025415
Gene position: 650713-651606 (Clockwise)
Preceding gene: 124025414
Following gene: 124025417
Centisome position: 34.9
GC content: 36.13
Gene sequence:
>894_bases ATGGCATTAATACTTCCTCGTAGTTATCATAAAATATCATCGATAGAAAAAAATCATATTTCATGGATTGAGCCTGAATT AGCAGAAAGACAGGATATTAGACCTCTTAGGATTGGGATATTAAATATTATGCCTTTGGGAAAACAATATGAATTTAATT TATTGCACCCTTTAGGACTGTCTCCTCTACAAATAGAACCTATATGGATAAGATTGAAATCCCATTCATATAGGACTTGG GATCTAGAACATCTGAAAAACTTATATGTTCATTGGGAGGAGGCAATGTCTCCCACTCCTCTTGATGGGTTGATTATTAC TGGAGCACCTGTTGAGCACCTTCCGTTTGAAGAAGTTCATTATTGGAAGGAATTAGTAAATCTAATTGAGGAAGCAAAAT TAAAATGTGCAAGTACCCTAGGATTGTGTTGGGCTGGTTTTGCAATGGCTTATATGGCTGGAGTTGAGAAAGAAAATTTT AATAAAAAGCTTTTTGGTGTATATCCAATGAGAAGTCTTGTGCCTAGTCATTCTTTAATGGGAACACAGGATGATGAGTT CTTCTGTCCCCAAAGTAGGCATGCTGGTTTACCAGATATCGAAATGGAAAAAGCAGAACAAAAAGGCAAGCTAAGATTAT TGGCTCATGGAGAAAAAGTAGGCTACACAATTTTTGAAACACCTGACCAGAGGCAATTAATGCATTTAGGACATCCTGAA TATAACGTTGATAGATTAAAATCTGAGATGGAAAGGGATAAGAAAAGAGGTGATGTACCTCCTCCAGAAAATTTTGATTT GACCAAATCAAATACCTCATGGCGATCACATAGAAACTTATTATTTCAACAATGGTTGTGGTTCTGTTATCAACGTGTAA GCCTGAGCGTTTAA
Upstream 100 bases:
>100_bases ATGGTAAGAGTGTCTGTTGGTATAGAACATATTGATGATATCTTAGAGGATTTCGAGCAGGCTCTAAATTTAATTTAATT TTCCAAGGAGGTATATAGAT
Downstream 100 bases:
>100_bases CTTTTTTGGATTTTTAGGGATAAGCTTTTGGTTGAAAAAATTGACTATTTTAATGGTGGCATTATATTTTCTGGATCATG AATGGCTTTGAGCTCTTCTA
Product: putative homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MALILPRSYHKISSIEKNHISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLKSHSYRTW DLEHLKNLYVHWEEAMSPTPLDGLIITGAPVEHLPFEEVHYWKELVNLIEEAKLKCASTLGLCWAGFAMAYMAGVEKENF NKKLFGVYPMRSLVPSHSLMGTQDDEFFCPQSRHAGLPDIEMEKAEQKGKLRLLAHGEKVGYTIFETPDQRQLMHLGHPE YNVDRLKSEMERDKKRGDVPPPENFDLTKSNTSWRSHRNLLFQQWLWFCYQRVSLSV
Sequences:
>Translated_297_residues MALILPRSYHKISSIEKNHISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLKSHSYRTW DLEHLKNLYVHWEEAMSPTPLDGLIITGAPVEHLPFEEVHYWKELVNLIEEAKLKCASTLGLCWAGFAMAYMAGVEKENF NKKLFGVYPMRSLVPSHSLMGTQDDEFFCPQSRHAGLPDIEMEKAEQKGKLRLLAHGEKVGYTIFETPDQRQLMHLGHPE YNVDRLKSEMERDKKRGDVPPPENFDLTKSNTSWRSHRNLLFQQWLWFCYQRVSLSV >Mature_296_residues ALILPRSYHKISSIEKNHISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLKSHSYRTWD LEHLKNLYVHWEEAMSPTPLDGLIITGAPVEHLPFEEVHYWKELVNLIEEAKLKCASTLGLCWAGFAMAYMAGVEKENFN KKLFGVYPMRSLVPSHSLMGTQDDEFFCPQSRHAGLPDIEMEKAEQKGKLRLLAHGEKVGYTIFETPDQRQLMHLGHPEY NVDRLKSEMERDKKRGDVPPPENFDLTKSNTSWRSHRNLLFQQWLWFCYQRVSLSV
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=299, Percent_Identity=34.4481605351171, Blast_Score=158, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 34698; Mature: 34566
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILPRSYHKISSIEKNHISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGL CEEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHEEEEEHEECCCCCCCEEEECCCCC SPLQIEPIWIRLKSHSYRTWDLEHLKNLYVHWEEAMSPTPLDGLIITGAPVEHLPFEEVH CCEEEEEEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHH YWKELVNLIEEAKLKCASTLGLCWAGFAMAYMAGVEKENFNKKLFGVYPMRSLVPSHSLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCC GTQDDEFFCPQSRHAGLPDIEMEKAEQKGKLRLLAHGEKVGYTIFETPDQRQLMHLGHPE CCCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEECCCCHHHHHHCCCCC YNVDRLKSEMERDKKRGDVPPPENFDLTKSNTSWRSHRNLLFQQWLWFCYQRVSLSV CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALILPRSYHKISSIEKNHISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGL EEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHEEEEEHEECCCCCCCEEEECCCCC SPLQIEPIWIRLKSHSYRTWDLEHLKNLYVHWEEAMSPTPLDGLIITGAPVEHLPFEEVH CCEEEEEEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHH YWKELVNLIEEAKLKCASTLGLCWAGFAMAYMAGVEKENFNKKLFGVYPMRSLVPSHSLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCC GTQDDEFFCPQSRHAGLPDIEMEKAEQKGKLRLLAHGEKVGYTIFETPDQRQLMHLGHPE CCCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEECCCCHHHHHHCCCCC YNVDRLKSEMERDKKRGDVPPPENFDLTKSNTSWRSHRNLLFQQWLWFCYQRVSLSV CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]