Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025413
Identifier: 124025413
GI number: 124025413
Start: 648617
End: 649312
Strand: Direct
Name: 124025413
Synonym: NATL1_07061
Alternate gene names: NA
Gene position: 648617-649312 (Clockwise)
Preceding gene: 124025412
Following gene: 124025414
Centisome position: 34.78
GC content: 34.34
Gene sequence:
>696_bases GTGGCAAAGGAATTAACCCATAGAGCCGATGAGCTTAAACAGTTAGGTTGGAATCAGGAAGATTTGTACAAATATATTGA GTTATGGGATTACAGACAAAGGTGGGGCTCTATAAATCTAGAGAGAGAAGATAGGTTGTTTCTAAGAAAAGCAGAATCTT TATTGCCTGAAATTTCTAAAAGCAAAGTTTCAGTTAAAAAACCTCTCAAGGAAAAGTCATATTATTGCTGGATTCAGTTT TTCCTGAATGAAATGAATGATTTTGAGTTGAACGAAAATTTAGACGATGGCATGAGAGGGGTTTGGCCTATTTTTCTAGA GGAGGAACTTCGAGTAATTGATTATTTCGAACCAGTTTTAGGCTTGCCGGATACAATTAAGGCTAAATTAATCGGCCCAA TTAGAGAGAACTTGGTCAAAACAGCTTTAGAAATCTACAAAGAATCAGTTATTACAAAGCAATTTGATTTCCAAGGGGCT TTGGCTAATGCCAAATCTAGTGGTAAAAACTCTAGTTGGAGATCTCTTAGAGATGGTGATTTTGAGACCAATCAAGACTA TCAAATTATTGATAAAGATAACGTTCTAGAATTCCGTAAGAAAGTCAATGAAAAGCTTTTATCATTTATAAAAGAGAATT TACCATCTCTAGCTGAGTCAGATAAATCTTTACCTCCTAATGATTGGATAAATTAA
Upstream 100 bases:
>100_bases TTCTTCAAACCCAAATTTTGTCTCCGATGTACAAAATATTGTTTAGGGTTTCACATAATCCAACTTATCACTAAAGTGAA ATCGATATTTATTTTTTCTT
Downstream 100 bases:
>100_bases TAGCCAATTCTGAACTTATGTGGCTAAAAAGAAAATAGAGATAATTAATTCTTTGACTTCCCAACGTTTTGAAACTCTTC AATTGCATGCAGGTCAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAKELTHRADELKQLGWNQEDLYKYIELWDYRQRWGSINLEREDRLFLRKAESLLPEISKSKVSVKKPLKEKSYYCWIQF FLNEMNDFELNENLDDGMRGVWPIFLEEELRVIDYFEPVLGLPDTIKAKLIGPIRENLVKTALEIYKESVITKQFDFQGA LANAKSSGKNSSWRSLRDGDFETNQDYQIIDKDNVLEFRKKVNEKLLSFIKENLPSLAESDKSLPPNDWIN
Sequences:
>Translated_231_residues MAKELTHRADELKQLGWNQEDLYKYIELWDYRQRWGSINLEREDRLFLRKAESLLPEISKSKVSVKKPLKEKSYYCWIQF FLNEMNDFELNENLDDGMRGVWPIFLEEELRVIDYFEPVLGLPDTIKAKLIGPIRENLVKTALEIYKESVITKQFDFQGA LANAKSSGKNSSWRSLRDGDFETNQDYQIIDKDNVLEFRKKVNEKLLSFIKENLPSLAESDKSLPPNDWIN >Mature_230_residues AKELTHRADELKQLGWNQEDLYKYIELWDYRQRWGSINLEREDRLFLRKAESLLPEISKSKVSVKKPLKEKSYYCWIQFF LNEMNDFELNENLDDGMRGVWPIFLEEELRVIDYFEPVLGLPDTIKAKLIGPIRENLVKTALEIYKESVITKQFDFQGAL ANAKSSGKNSSWRSLRDGDFETNQDYQIIDKDNVLEFRKKVNEKLLSFIKENLPSLAESDKSLPPNDWIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27291; Mature: 27160
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKELTHRADELKQLGWNQEDLYKYIELWDYRQRWGSINLEREDRLFLRKAESLLPEISK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SKVSVKKPLKEKSYYCWIQFFLNEMNDFELNENLDDGMRGVWPIFLEEELRVIDYFEPVL HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH GLPDTIKAKLIGPIRENLVKTALEIYKESVITKQFDFQGALANAKSSGKNSSWRSLRDGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCC FETNQDYQIIDKDNVLEFRKKVNEKLLSFIKENLPSLAESDKSLPPNDWIN CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKELTHRADELKQLGWNQEDLYKYIELWDYRQRWGSINLEREDRLFLRKAESLLPEISK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SKVSVKKPLKEKSYYCWIQFFLNEMNDFELNENLDDGMRGVWPIFLEEELRVIDYFEPVL HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH GLPDTIKAKLIGPIRENLVKTALEIYKESVITKQFDFQGALANAKSSGKNSSWRSLRDGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCC FETNQDYQIIDKDNVLEFRKKVNEKLLSFIKENLPSLAESDKSLPPNDWIN CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA