Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is met17 [H]
Identifier: 124025414
GI number: 124025414
Start: 649332
End: 650690
Strand: Direct
Name: met17 [H]
Synonym: NATL1_07071
Alternate gene names: 124025414
Gene position: 649332-650690 (Clockwise)
Preceding gene: 124025413
Following gene: 124025415
Centisome position: 34.82
GC content: 37.45
Gene sequence:
>1359_bases GTGGCTAAAAAGAAAATAGAGATAATTAATTCTTTGACTTCCCAACGTTTTGAAACTCTTCAATTGCATGCAGGTCAAGT ACCAGATCCTGTTACCAATTCTAGAGCGGTTCCTATTTATCAGACAAGTTCATATGTTTTTAACGATGTAGATCATGGAG CAAATTTATTTGGTTTGAAGGAATTTGGAAATATTTATACGCGCTTGATGAATCCTACAACGGATGTTTTCGAAAAAAGA ATTGCAGCACTTGAAGGAGGAGTAGCTGCTTTAGCAACAGCATCAGGACAGTCTGCACAATTCATTGCGATTACAAACTT CCTTACTGCAGGAGACAGCTTTGTATCAACATCGTTTTTGTATGGTGGCAGCTATAACCAATTCAAAGTTCAATTTCCAC GATTAGGAATCAATGTCAAGTTTGCTGATGGTGATGATGCAGAAAGCTTTGAAGAACAAATTGATTCATCTACAAAAGCA ATTTATGTAGAGTCAATGGGTAATCCTAGGTTTAACATCCCTGATTTTGATGGACTATCGAAATTAGCTAAATCGAAAAA TATCCCCTTAATTGTAGATAACACTCTTGGTGCTGCTGGAGCTTTAATTCGTCCTATTGAACATGGCGCAGATGTGGTTG TTCAAAGTGCTACAAAATGGATAGGAGGACATGGAACAAGTCTTGGAGGGGTAATTGTTGATGCAGGAACTTTTGATTGG GGAAATGGAAAATATCCTTTAATGAGTCAACCAAGCGCGGCTTATCATGGTTTAGTTCATTGGGATGCTTTTGGATTTGG GAGTGATATTTGTGGAATGCTTGGAGTCCCTACAGATCGAAACATTGCTTTTGCTTTGAGAGCTAGGTTAGAGGGGTTAC GAGATTGGGGCCCTGCGATTAGTCCTTTTAATTCTTTTTTATTACTTCAAGGATTAGAAACTTTAAGTTTAAGAATAGAA AGACATTGCTCTAATGCACTTGCATTGGCTAAGTGGTTAGACGATCATTCGAAAGTTGATAATGTTAGTTATCCAGGATT ACCATCGGACAAATACCATTCAAGAGCCTCTAATTATATGACCAATAGAGGAAAAGGTTCTATGTTGATTTTCTCTCTGA AAGGTGGCTTTGATGATGCTGTGAAGTTTATAAACTCTTTAAAACTTTCTAGTCATCTAGCAAATGTAGGCGATGCAAAA ACATTAGTAATTCATCCTGCTTCAACAACTCATCAACAACTATCCCCAGAAGAACAGTTGTCCGCAGGTGTTACTCCAAC TATGGTAAGAGTGTCTGTTGGTATAGAACATATTGATGATATCTTAGAGGATTTCGAGCAGGCTCTAAATTTAATTTAA
Upstream 100 bases:
>100_bases CTTTTATCATTTATAAAAGAGAATTTACCATCTCTAGCTGAGTCAGATAAATCTTTACCTCCTAATGATTGGATAAATTA ATAGCCAATTCTGAACTTAT
Downstream 100 bases:
>100_bases TTTTCCAAGGAGGTATATAGATATGGCATTAATACTTCCTCGTAGTTATCATAAAATATCATCGATAGAAAAAAATCATA TTTCATGGATTGAGCCTGAA
Product: putative O-Acetyl homoserine sulfhydrylase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MAKKKIEIINSLTSQRFETLQLHAGQVPDPVTNSRAVPIYQTSSYVFNDVDHGANLFGLKEFGNIYTRLMNPTTDVFEKR IAALEGGVAALATASGQSAQFIAITNFLTAGDSFVSTSFLYGGSYNQFKVQFPRLGINVKFADGDDAESFEEQIDSSTKA IYVESMGNPRFNIPDFDGLSKLAKSKNIPLIVDNTLGAAGALIRPIEHGADVVVQSATKWIGGHGTSLGGVIVDAGTFDW GNGKYPLMSQPSAAYHGLVHWDAFGFGSDICGMLGVPTDRNIAFALRARLEGLRDWGPAISPFNSFLLLQGLETLSLRIE RHCSNALALAKWLDDHSKVDNVSYPGLPSDKYHSRASNYMTNRGKGSMLIFSLKGGFDDAVKFINSLKLSSHLANVGDAK TLVIHPASTTHQQLSPEEQLSAGVTPTMVRVSVGIEHIDDILEDFEQALNLI
Sequences:
>Translated_452_residues MAKKKIEIINSLTSQRFETLQLHAGQVPDPVTNSRAVPIYQTSSYVFNDVDHGANLFGLKEFGNIYTRLMNPTTDVFEKR IAALEGGVAALATASGQSAQFIAITNFLTAGDSFVSTSFLYGGSYNQFKVQFPRLGINVKFADGDDAESFEEQIDSSTKA IYVESMGNPRFNIPDFDGLSKLAKSKNIPLIVDNTLGAAGALIRPIEHGADVVVQSATKWIGGHGTSLGGVIVDAGTFDW GNGKYPLMSQPSAAYHGLVHWDAFGFGSDICGMLGVPTDRNIAFALRARLEGLRDWGPAISPFNSFLLLQGLETLSLRIE RHCSNALALAKWLDDHSKVDNVSYPGLPSDKYHSRASNYMTNRGKGSMLIFSLKGGFDDAVKFINSLKLSSHLANVGDAK TLVIHPASTTHQQLSPEEQLSAGVTPTMVRVSVGIEHIDDILEDFEQALNLI >Mature_451_residues AKKKIEIINSLTSQRFETLQLHAGQVPDPVTNSRAVPIYQTSSYVFNDVDHGANLFGLKEFGNIYTRLMNPTTDVFEKRI AALEGGVAALATASGQSAQFIAITNFLTAGDSFVSTSFLYGGSYNQFKVQFPRLGINVKFADGDDAESFEEQIDSSTKAI YVESMGNPRFNIPDFDGLSKLAKSKNIPLIVDNTLGAAGALIRPIEHGADVVVQSATKWIGGHGTSLGGVIVDAGTFDWG NGKYPLMSQPSAAYHGLVHWDAFGFGSDICGMLGVPTDRNIAFALRARLEGLRDWGPAISPFNSFLLLQGLETLSLRIER HCSNALALAKWLDDHSKVDNVSYPGLPSDKYHSRASNYMTNRGKGSMLIFSLKGGFDDAVKFINSLKLSSHLANVGDAKT LVIHPASTTHQQLSPEEQLSAGVTPTMVRVSVGIEHIDDILEDFEQALNLI
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=439, Percent_Identity=30.5239179954442, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI25453487, Length=438, Percent_Identity=27.8538812785388, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI299473759, Length=439, Percent_Identity=27.5626423690205, Blast_Score=129, Evalue=4e-30, Organism=Escherichia coli, GI1790375, Length=434, Percent_Identity=29.4930875576037, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1789383, Length=440, Percent_Identity=20.9090909090909, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71980708, Length=454, Percent_Identity=30.1762114537445, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17538055, Length=443, Percent_Identity=31.8284424379233, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17560056, Length=443, Percent_Identity=30.2483069977427, Blast_Score=167, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6323333, Length=451, Percent_Identity=50.9977827050998, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6319307, Length=442, Percent_Identity=30.9954751131222, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6321254, Length=462, Percent_Identity=25.3246753246753, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321170, Length=369, Percent_Identity=25.4742547425474, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI19922554, Length=438, Percent_Identity=28.310502283105, Blast_Score=167, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 48963; Mature: 48832
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKIEIINSLTSQRFETLQLHAGQVPDPVTNSRAVPIYQTSSYVFNDVDHGANLFGLK CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEEHH EFGNIYTRLMNPTTDVFEKRIAALEGGVAALATASGQSAQFIAITNFLTAGDSFVSTSFL HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHCCCCHHHHHEE YGGSYNQFKVQFPRLGINVKFADGDDAESFEEQIDSSTKAIYVESMGNPRFNIPDFDGLS ECCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH KLAKSKNIPLIVDNTLGAAGALIRPIEHGADVVVQSATKWIGGHGTSLGGVIVDAGTFDW HHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEC GNGKYPLMSQPSAAYHGLVHWDAFGFGSDICGMLGVPTDRNIAFALRARLEGLRDWGPAI CCCCCCCCCCCCHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC SPFNSFLLLQGLETLSLRIERHCSNALALAKWLDDHSKVDNVSYPGLPSDKYHSRASNYM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TNRGKGSMLIFSLKGGFDDAVKFINSLKLSSHLANVGDAKTLVIHPASTTHQQLSPEEQL CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCHHHH SAGVTPTMVRVSVGIEHIDDILEDFEQALNLI HCCCCCEEEEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKKKIEIINSLTSQRFETLQLHAGQVPDPVTNSRAVPIYQTSSYVFNDVDHGANLFGLK CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEEHH EFGNIYTRLMNPTTDVFEKRIAALEGGVAALATASGQSAQFIAITNFLTAGDSFVSTSFL HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHCCCCHHHHHEE YGGSYNQFKVQFPRLGINVKFADGDDAESFEEQIDSSTKAIYVESMGNPRFNIPDFDGLS ECCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH KLAKSKNIPLIVDNTLGAAGALIRPIEHGADVVVQSATKWIGGHGTSLGGVIVDAGTFDW HHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEC GNGKYPLMSQPSAAYHGLVHWDAFGFGSDICGMLGVPTDRNIAFALRARLEGLRDWGPAI CCCCCCCCCCCCHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC SPFNSFLLLQGLETLSLRIERHCSNALALAKWLDDHSKVDNVSYPGLPSDKYHSRASNYM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TNRGKGSMLIFSLKGGFDDAVKFINSLKLSSHLANVGDAKTLVIHPASTTHQQLSPEEQL CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCHHHH SAGVTPTMVRVSVGIEHIDDILEDFEQALNLI HCCCCCEEEEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]