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The map label for this gene is 124025340

Identifier: 124025340

GI number: 124025340

Start: 571517

End: 571888

Strand: Reverse

Name: 124025340

Synonym: NATL1_06291

Alternate gene names: NA

Gene position: 571888-571517 (Counterclockwise)

Preceding gene: 124025341

Following gene: 124025334

Centisome position: 30.67

GC content: 34.68

Gene sequence:

>372_bases
ATGAAAAAATATACAAATTTTTTTTTCATAAAATTAAGAGGTTTTTTTCTAATCAGTATTTGTTGCACATGTTTTTATTT
AAGTTTGCCGAAAGAGCTCAATGCTATTGAAGCAGATTCAGGGAAAAATCTTTTTAACCACAACTGTGCTGGATGTCATA
TTAATGGTGGGAACATAATCAGAAGATCAAAGAATTTGAAGATTTCATCATTAAAGCGTAATGGAATTGACAATCCAGAA
GCTATAGCGAATATCGCAAGACAAGGGGTAGGGATAATGAGTGGTTATGAAGATGAGCTAGGAGATAATGGCGATCAAAT
CGTAGCTAATTGGGTCTGGGAGCAAGCTCAAAAAGCTTGGGTCCAAGAGTAA

Upstream 100 bases:

>100_bases
AAGAGCTTTGAATTAAATTCTTCTGGACAACTTGATCTTCTTGACGAGATTTGTGAGGATCTTTCAAAAATTAATTTCAA
TAAATAAGTTTTACAAGACT

Downstream 100 bases:

>100_bases
ATTTCGAAATCAGTCCATATTCCCTCTCTCCAGTAAACGTCCTCTTTGATAAGACTTCTAATATATTCAATGTCTTCAGA
TTTAAATATCCCAAAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKKYTNFFFIKLRGFFLISICCTCFYLSLPKELNAIEADSGKNLFNHNCAGCHINGGNIIRRSKNLKISSLKRNGIDNPE
AIANIARQGVGIMSGYEDELGDNGDQIVANWVWEQAQKAWVQE

Sequences:

>Translated_123_residues
MKKYTNFFFIKLRGFFLISICCTCFYLSLPKELNAIEADSGKNLFNHNCAGCHINGGNIIRRSKNLKISSLKRNGIDNPE
AIANIARQGVGIMSGYEDELGDNGDQIVANWVWEQAQKAWVQE
>Mature_123_residues
MKKYTNFFFIKLRGFFLISICCTCFYLSLPKELNAIEADSGKNLFNHNCAGCHINGGNIIRRSKNLKISSLKRNGIDNPE
AIANIARQGVGIMSGYEDELGDNGDQIVANWVWEQAQKAWVQE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cellular thylakoid lumen (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PetJ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13846; Mature: 13846

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYTNFFFIKLRGFFLISICCTCFYLSLPKELNAIEADSGKNLFNHNCAGCHINGGNII
CCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEE
RRSKNLKISSLKRNGIDNPEAIANIARQGVGIMSGYEDELGDNGDQIVANWVWEQAQKAW
ECCCCCEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
VQE
CCC
>Mature Secondary Structure
MKKYTNFFFIKLRGFFLISICCTCFYLSLPKELNAIEADSGKNLFNHNCAGCHINGGNII
CCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEE
RRSKNLKISSLKRNGIDNPEAIANIARQGVGIMSGYEDELGDNGDQIVANWVWEQAQKAW
ECCCCCEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
VQE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]