| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025332
Identifier: 124025332
GI number: 124025332
Start: 564292
End: 565533
Strand: Reverse
Name: 124025332
Synonym: NATL1_06211
Alternate gene names: NA
Gene position: 565533-564292 (Counterclockwise)
Preceding gene: 124025334
Following gene: 124025330
Centisome position: 30.33
GC content: 35.51
Gene sequence:
>1242_bases ATGAATCCAACCAGAAATGCAATGAGTTGGGAAGAATTAGCAATATATGCAGCCGATCCAATTGATCAAATCAATGGATT AAACAACCCATATTCCACACTTCGTCTTTTTAATAAAAGTGAGTCTCAGGCAATTGTTACTCTTTACAGAGACAATCATG CTTGGTGTCCTTATTGCCAAAAAGTTTGGATTTGGTTAGAGCTTAAAAATATTCCTTACCGGATTAAAAAAGTTACAATG CGTTGCTACGGAGAAAAAGAAAAATGGTATTTAAAAAAAGTGCCCTCAGGAATGCTTCCTGCAATAGAAATTGAAAATCA TGTAATCACAGAAAGTGATGAGATCCTATTTGTGTTAGAAGAAATTTATGGTCCTTTAGGTCAATCTCTAAATGAGAATA AAGTCTTAGAGCATAGGAGACTTGAAAGAGAACTATTTTCATCATGGTGTAACTGGTTATGTCGCAACTCTCTTTTCCAA GCCCAAGAAGAACAAAAGAAAGAGAATTTCAAAAATGTTGCAAATAAATTTGAAAAAGAACTACAAAAAAATGCTTCAGG GTGGCTAACACCTGTCTCAACAAAGAATGGCGAAAAGCCTGGATCAGCAGACGTAATTTTCATTCCATATGTTGAAAGAA TGAATGCCTCATTGGCTTACTATAAAGGATATTCATTGAGAGATGAGCACCCTATTATAAATACATGGCTTAAAAACCTT GAAAAACTTGAGGAGTATAGAGGGACTCAAGGAGATTTTCATACTCATGCTCATGATTTACCTCCTCAAATGGGAGGTTG CTTTACTTATTCAAATAAAAACCAACAATTATTTGCCCAAGAAATTGATATAGGTTCTGGGTTAGGACAATTAGAACTGG TAGATTTCAAAGTTGACCAAAAATCGGAACAACATTTTGAGGCATTAGCTTTAGAAAGAGTGATCAGACATAAAGAAAGG ATCGTTTCTGTAAGCCCAATGAAAAATAAATTATTTGATCAGCCATTGAGAGCAGCCTTAACTTCTATGATTTCAAAAAA AGATTGCCTTCCAGAGCAGAATAGTGCCTCTGCATTACGTTACCTCCGAGATAGAATTTCAGTGCCGAGAGATATGCCTT TATTATCAGGGAGATTATTTAGACAAGCTCTTGAACGCACAGCAAATATTGATGGTAGCGATCCAGGTCCTGAAATACCT ACACGAAATAGGCTAGATCAAAATCCCATACAGTTTAATTAA
Upstream 100 bases:
>100_bases GCAGCAGCTAATCCACCGGATCCTGCACCAATGACAATTAAATCAAAAGAGCTTTTCAATTTTGCAACCTAGTATTATTT CCCTATTCTCGTTGAAATAA
Downstream 100 bases:
>100_bases TTAATAAAAATCTCACTCACTATCAAATATTAGTTTAACGACGTTTCCGTGAATCGATCTGAAGAAGATCCTTAACTTTT TGAACTTGACTTGCTAATTG
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MNPTRNAMSWEELAIYAADPIDQINGLNNPYSTLRLFNKSESQAIVTLYRDNHAWCPYCQKVWIWLELKNIPYRIKKVTM RCYGEKEKWYLKKVPSGMLPAIEIENHVITESDEILFVLEEIYGPLGQSLNENKVLEHRRLERELFSSWCNWLCRNSLFQ AQEEQKKENFKNVANKFEKELQKNASGWLTPVSTKNGEKPGSADVIFIPYVERMNASLAYYKGYSLRDEHPIINTWLKNL EKLEEYRGTQGDFHTHAHDLPPQMGGCFTYSNKNQQLFAQEIDIGSGLGQLELVDFKVDQKSEQHFEALALERVIRHKER IVSVSPMKNKLFDQPLRAALTSMISKKDCLPEQNSASALRYLRDRISVPRDMPLLSGRLFRQALERTANIDGSDPGPEIP TRNRLDQNPIQFN
Sequences:
>Translated_413_residues MNPTRNAMSWEELAIYAADPIDQINGLNNPYSTLRLFNKSESQAIVTLYRDNHAWCPYCQKVWIWLELKNIPYRIKKVTM RCYGEKEKWYLKKVPSGMLPAIEIENHVITESDEILFVLEEIYGPLGQSLNENKVLEHRRLERELFSSWCNWLCRNSLFQ AQEEQKKENFKNVANKFEKELQKNASGWLTPVSTKNGEKPGSADVIFIPYVERMNASLAYYKGYSLRDEHPIINTWLKNL EKLEEYRGTQGDFHTHAHDLPPQMGGCFTYSNKNQQLFAQEIDIGSGLGQLELVDFKVDQKSEQHFEALALERVIRHKER IVSVSPMKNKLFDQPLRAALTSMISKKDCLPEQNSASALRYLRDRISVPRDMPLLSGRLFRQALERTANIDGSDPGPEIP TRNRLDQNPIQFN >Mature_413_residues MNPTRNAMSWEELAIYAADPIDQINGLNNPYSTLRLFNKSESQAIVTLYRDNHAWCPYCQKVWIWLELKNIPYRIKKVTM RCYGEKEKWYLKKVPSGMLPAIEIENHVITESDEILFVLEEIYGPLGQSLNENKVLEHRRLERELFSSWCNWLCRNSLFQ AQEEQKKENFKNVANKFEKELQKNASGWLTPVSTKNGEKPGSADVIFIPYVERMNASLAYYKGYSLRDEHPIINTWLKNL EKLEEYRGTQGDFHTHAHDLPPQMGGCFTYSNKNQQLFAQEIDIGSGLGQLELVDFKVDQKSEQHFEALALERVIRHKER IVSVSPMKNKLFDQPLRAALTSMISKKDCLPEQNSASALRYLRDRISVPRDMPLLSGRLFRQALERTANIDGSDPGPEIP TRNRLDQNPIQFN
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI25144449, Length=202, Percent_Identity=27.2277227722772, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47927; Mature: 47927
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTRNAMSWEELAIYAADPIDQINGLNNPYSTLRLFNKSESQAIVTLYRDNHAWCPYCQ CCCCCCCCCHHHEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHC KVWIWLELKNIPYRIKKVTMRCYGEKEKWYLKKVPSGMLPAIEIENHVITESDEILFVLE EEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCEECCCCCHHHHHH EIYGPLGQSLNENKVLEHRRLERELFSSWCNWLCRNSLFQAQEEQKKENFKNVANKFEKE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKNASGWLTPVSTKNGEKPGSADVIFIPYVERMNASLAYYKGYSLRDEHPIINTWLKNL HHHCCCCCEEECCCCCCCCCCCCCEEEECCHHHCCCCEEEECCCCCCCCCCHHHHHHHHH EKLEEYRGTQGDFHTHAHDLPPQMGGCFTYSNKNQQLFAQEIDIGSGLGQLELVDFKVDQ HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECCC KSEQHFEALALERVIRHKERIVSVSPMKNKLFDQPLRAALTSMISKKDCLPEQNSASALR CHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YLRDRISVPRDMPLLSGRLFRQALERTANIDGSDPGPEIPTRNRLDQNPIQFN HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPTRNAMSWEELAIYAADPIDQINGLNNPYSTLRLFNKSESQAIVTLYRDNHAWCPYCQ CCCCCCCCCHHHEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHC KVWIWLELKNIPYRIKKVTMRCYGEKEKWYLKKVPSGMLPAIEIENHVITESDEILFVLE EEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCEECCCCCHHHHHH EIYGPLGQSLNENKVLEHRRLERELFSSWCNWLCRNSLFQAQEEQKKENFKNVANKFEKE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKNASGWLTPVSTKNGEKPGSADVIFIPYVERMNASLAYYKGYSLRDEHPIINTWLKNL HHHCCCCCEEECCCCCCCCCCCCCEEEECCHHHCCCCEEEECCCCCCCCCCHHHHHHHHH EKLEEYRGTQGDFHTHAHDLPPQMGGCFTYSNKNQQLFAQEIDIGSGLGQLELVDFKVDQ HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECCC KSEQHFEALALERVIRHKERIVSVSPMKNKLFDQPLRAALTSMISKKDCLPEQNSASALR CHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YLRDRISVPRDMPLLSGRLFRQALERTANIDGSDPGPEIPTRNRLDQNPIQFN HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA