| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025329
Identifier: 124025329
GI number: 124025329
Start: 561248
End: 561952
Strand: Reverse
Name: 124025329
Synonym: NATL1_06181
Alternate gene names: NA
Gene position: 561952-561248 (Counterclockwise)
Preceding gene: 124025330
Following gene: 124025325
Centisome position: 30.14
GC content: 30.21
Gene sequence:
>705_bases ATGGCTAGATCACAAAAAATTCCGGATCTCAGCATCATCATACCAACTTTAAATGAAGCGGATCACCTCCCTCTTCTTCT TGCTGATTTAAATGAATGGCCATATAATTTTGAATTAATCATAGTTGATGGAGGAAGTATAGATTTAACTATTTCGATTG CACAAATACAAGGAATAGATGTTATTAAAAGCAGTAAAAAGAATAGAGGCTATCAATTAAAAAAAGGGGCATCAAAGGCA AGAGGAGATTGGCTTTTATTTCTACATGCCGATAGTAGACTAAGCCCCAGTTGGTTTAAAAGGTTATCTCAAATAATACA AAATAAAAAGTCAGAAAATTTTGCATGGTATTTTGATTTTAAAATCAAAAAGCATAATTTAGAATTCAGATTTTTAGAAA TAGCAGTAGCACTAAGAAGTCATTTATTACAACATCCTTATGGAGATCAAGGCCTACTAATACATAAAGATCTCTATTCC AATACAGGAGGGTATTCATCCTTGAAAATAATGGAAGATATCGACTTGATAACAAGAATTACTAAAAAGACTAAATTAAA GCGTATTAGAGAAAATATATATACAGATGATATAAAGTGGAGGAATTCAAATATAATAAAACGTGCAATTAAAAATGCTA AATTAAGAAATATGTGGCGTCAGGGTTGTGACATAGATTATCTTTCAAAAGAATATAATTCATGA
Upstream 100 bases:
>100_bases AAGTCCTAAAAGAAACAATTCGATTAGCATCCTTAAATCAAATCGATTATCAACTACTTCAAACTAAAAATGATCTGGAT AATATTATGGATTTGTCACC
Downstream 100 bases:
>100_bases TTTTCTAATCCCTATCTAACCAATTAATTTGAATACCAAAATGCACATTTATTACCTTTTGGCTCTAAAATCCACCCTTG CCTTTTATAAAAAGTAATAA
Product: cell wall biosynthesis glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MARSQKIPDLSIIIPTLNEADHLPLLLADLNEWPYNFELIIVDGGSIDLTISIAQIQGIDVIKSSKKNRGYQLKKGASKA RGDWLLFLHADSRLSPSWFKRLSQIIQNKKSENFAWYFDFKIKKHNLEFRFLEIAVALRSHLLQHPYGDQGLLIHKDLYS NTGGYSSLKIMEDIDLITRITKKTKLKRIRENIYTDDIKWRNSNIIKRAIKNAKLRNMWRQGCDIDYLSKEYNS
Sequences:
>Translated_234_residues MARSQKIPDLSIIIPTLNEADHLPLLLADLNEWPYNFELIIVDGGSIDLTISIAQIQGIDVIKSSKKNRGYQLKKGASKA RGDWLLFLHADSRLSPSWFKRLSQIIQNKKSENFAWYFDFKIKKHNLEFRFLEIAVALRSHLLQHPYGDQGLLIHKDLYS NTGGYSSLKIMEDIDLITRITKKTKLKRIRENIYTDDIKWRNSNIIKRAIKNAKLRNMWRQGCDIDYLSKEYNS >Mature_233_residues ARSQKIPDLSIIIPTLNEADHLPLLLADLNEWPYNFELIIVDGGSIDLTISIAQIQGIDVIKSSKKNRGYQLKKGASKAR GDWLLFLHADSRLSPSWFKRLSQIIQNKKSENFAWYFDFKIKKHNLEFRFLEIAVALRSHLLQHPYGDQGLLIHKDLYSN TGGYSSLKIMEDIDLITRITKKTKLKRIRENIYTDDIKWRNSNIIKRAIKNAKLRNMWRQGCDIDYLSKEYNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27293; Mature: 27162
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSQKIPDLSIIIPTLNEADHLPLLLADLNEWPYNFELIIVDGGSIDLTISIAQIQGID CCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCH VIKSSKKNRGYQLKKGASKARGDWLLFLHADSRLSPSWFKRLSQIIQNKKSENFAWYFDF HHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE KIKKHNLEFRFLEIAVALRSHLLQHPYGDQGLLIHKDLYSNTGGYSSLKIMEDIDLITRI EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCEEHHHHHHHHHHHH TKKTKLKRIRENIYTDDIKWRNSNIIKRAIKNAKLRNMWRQGCDIDYLSKEYNS HHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure ARSQKIPDLSIIIPTLNEADHLPLLLADLNEWPYNFELIIVDGGSIDLTISIAQIQGID CCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCH VIKSSKKNRGYQLKKGASKARGDWLLFLHADSRLSPSWFKRLSQIIQNKKSENFAWYFDF HHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE KIKKHNLEFRFLEIAVALRSHLLQHPYGDQGLLIHKDLYSNTGGYSSLKIMEDIDLITRI EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCEEHHHHHHHHHHHH TKKTKLKRIRENIYTDDIKWRNSNIIKRAIKNAKLRNMWRQGCDIDYLSKEYNS HHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA