| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025323
Identifier: 124025323
GI number: 124025323
Start: 556645
End: 556875
Strand: Reverse
Name: 124025323
Synonym: NATL1_06121
Alternate gene names: NA
Gene position: 556875-556645 (Counterclockwise)
Preceding gene: 124025324
Following gene: 124025313
Centisome position: 29.86
GC content: 42.42
Gene sequence:
>231_bases ATGTCCACTGCCAAGTTGACCATTGGCGAATTAGAAGCAGGATACCCTCTTTATTGCAAAGCACTTAGGAGGCTTTTGCA ACAAGGACGTACCGCTGATCAGATTCAAAGAACTGTTTGCTGGAGCCACTTAGAGACTCTAAATCGCTGCTTACCAGGAA GATATAAAACCCCCTCCTACTTGATGGCATTAATCAAAAGAGACCTAGAACAACCAAAAGAAGAAGATTAA
Upstream 100 bases:
>100_bases AACAAAAAGTAAAAAAACAACATTATGACTAAATCGAGCCTTGCCACTTTGCTAAGTGGCCCCATTATTGACTAAGTTAA TTATTGATTAGCAATACACA
Downstream 100 bases:
>100_bases TTTTCTTCTTGTTTATTTAAAAAATCTATTTCACTTGCGAAATCATGATCATCTTTTGATATTTCCTCTTTTACATTATT TTCTTCAGGCCTGATGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSTAKLTIGELEAGYPLYCKALRRLLQQGRTADQIQRTVCWSHLETLNRCLPGRYKTPSYLMALIKRDLEQPKEED
Sequences:
>Translated_76_residues MSTAKLTIGELEAGYPLYCKALRRLLQQGRTADQIQRTVCWSHLETLNRCLPGRYKTPSYLMALIKRDLEQPKEED >Mature_75_residues STAKLTIGELEAGYPLYCKALRRLLQQGRTADQIQRTVCWSHLETLNRCLPGRYKTPSYLMALIKRDLEQPKEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8811; Mature: 8680
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAKLTIGELEAGYPLYCKALRRLLQQGRTADQIQRTVCWSHLETLNRCLPGRYKTPSY CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LMALIKRDLEQPKEED HHHHHHHHHHCCCCCC >Mature Secondary Structure STAKLTIGELEAGYPLYCKALRRLLQQGRTADQIQRTVCWSHLETLNRCLPGRYKTPSY CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LMALIKRDLEQPKEED HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA