Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025254
Identifier: 124025254
GI number: 124025254
Start: 491005
End: 491652
Strand: Direct
Name: 124025254
Synonym: NATL1_05431
Alternate gene names: NA
Gene position: 491005-491652 (Clockwise)
Preceding gene: 124025253
Following gene: 124025255
Centisome position: 26.33
GC content: 32.87
Gene sequence:
>648_bases ATGCAGAACCATCCAATCCCCTCGGTCACTGATCCATTGCAATACCGAGCAATTGGATTAGTTAGAGGTATTTACAAGCC TCAAGATGATGACACCTTTACTCGTGGAGCTCTAATTGATTCAAAAGGCAATGAAATAGATTCAGTTGTCCTTGGAAGAG TCATAACCTTGATTAGAAATCACGTCCCTCTAGAAAAACCTCACCTCTGGGTCGTATATCCAAGATGTAGGAATAATCAA AATCTTCATTTGCAAATCACAGGTATTTGGGAACCAAGTACTTTAAAAAAAGATCTTCTTGATAGCGAGGGATTGAATGA AAATTCAGGTTTTAAGGGGGATTCTGATTCTTTATTGGAAGGTGATGATTATTTTTCAATAAGAGGAGAATTAATTTTTA CTAAGCCAGAGGAAAAGGATGTAGTTATTAAAATTCGTCAAAAGCCAAGAAGTCAGCAAAAAAAAGCTTTACCTTTCAAA TTGAATCTTAAAGGTGAAGTACCTATTAATTATTTAAAACATTTTATTAGTCTAAATGTTCGTCGTGTTGACTATCAACT TTTGATTGAGGATTTTCAAATAATAGGCCCTCTTTCTAAACAACAAATAAACAATAAAAGTAAAAAAATCTTAAAAAATA AAAATTAG
Upstream 100 bases:
>100_bases GTCAGATGATGAGAATATCCCAAATGAATAAAAACACAATAGTATCCTTAGGCTTTTGGTAAATTTAAAATTGGTCCCTA ATGGCCTCTTAGTTAAATAG
Downstream 100 bases:
>100_bases TCTTATTTCGAGAATTATATATAAATGCATTCCATCTATAAAACTAATTATATATTTACTAGTAAATGAAATCTATTTTT ATTGATTGTAGTCTTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN
Sequences:
>Translated_215_residues MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN >Mature_215_residues MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24720; Mature: 24720
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHH HVPLEKPHLWVVYPRCRNNQNLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLE CCCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC GDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFKLNLKGEVPINYLKHFISLNV CCCEEEEECEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHHHCCC RRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN EEHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCC >Mature Secondary Structure MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHH HVPLEKPHLWVVYPRCRNNQNLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLE CCCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC GDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFKLNLKGEVPINYLKHFISLNV CCCEEEEECEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHHHCCC RRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN EEHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA