Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025238
Identifier: 124025238
GI number: 124025238
Start: 478248
End: 478631
Strand: Direct
Name: 124025238
Synonym: NATL1_05271
Alternate gene names: NA
Gene position: 478248-478631 (Clockwise)
Preceding gene: 124025237
Following gene: 124025239
Centisome position: 25.65
GC content: 28.65
Gene sequence:
>384_bases ATGCGGATAATTAATTTTTCTTCGAGATGGAATTATAAAAATATCTATATAATTAATCTCTTTGGCCTGATTTCCAAGTC TCCTCTTCAACTATCAAAAAGCAATGATCCAATAGGAGAAAATAATGATTTAATTACTTTAAAATCATTAGAATTTTGGC GGGAAAATAATAATTGTGATTTGTGGTTAGGATGGGGTGATAAAGGTCAATTAAATGGACGTGATCTTAAAGTTCTAAAA TTAATAAAAAATTTTTCAAATTTGAAATCCAATGAAAATAATTATTCCAAACGTGTTTTAAGTCTTGGCCTGAGTAAAAA AGGTAACCCTCGTCACCCTCTCTATATGCCTAATAAATCTTTCTTAAGAAGGTTTGATCTATAA
Upstream 100 bases:
>100_bases ATGGATCTTAAAAAGAGAGTTATTAAGTGGAAAAAAGACCATACTCTTTATTGGCTTAAATCCTTCAAAAGCTAATTCTT CCCATAACGATAGGACTCTA
Downstream 100 bases:
>100_bases TTTCGAATTGGTTTTGTCAGTTATTTTCTAAACGAGAATCTATAAATAATATTTGGATTGAAAGGGTTGCTACTCTATAA GAATATGTAAGTAAAATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MRIINFSSRWNYKNIYIINLFGLISKSPLQLSKSNDPIGENNDLITLKSLEFWRENNNCDLWLGWGDKGQLNGRDLKVLK LIKNFSNLKSNENNYSKRVLSLGLSKKGNPRHPLYMPNKSFLRRFDL
Sequences:
>Translated_127_residues MRIINFSSRWNYKNIYIINLFGLISKSPLQLSKSNDPIGENNDLITLKSLEFWRENNNCDLWLGWGDKGQLNGRDLKVLK LIKNFSNLKSNENNYSKRVLSLGLSKKGNPRHPLYMPNKSFLRRFDL >Mature_127_residues MRIINFSSRWNYKNIYIINLFGLISKSPLQLSKSNDPIGENNDLITLKSLEFWRENNNCDLWLGWGDKGQLNGRDLKVLK LIKNFSNLKSNENNYSKRVLSLGLSKKGNPRHPLYMPNKSFLRRFDL
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14889; Mature: 14889
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIINFSSRWNYKNIYIINLFGLISKSPLQLSKSNDPIGENNDLITLKSLEFWRENNNCD CEEECCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEECCCCEE LWLGWGDKGQLNGRDLKVLKLIKNFSNLKSNENNYSKRVLSLGLSKKGNPRHPLYMPNKS EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHH FLRRFDL HHHHCCC >Mature Secondary Structure MRIINFSSRWNYKNIYIINLFGLISKSPLQLSKSNDPIGENNDLITLKSLEFWRENNNCD CEEECCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEECCCCEE LWLGWGDKGQLNGRDLKVLKLIKNFSNLKSNENNYSKRVLSLGLSKKGNPRHPLYMPNKS EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHH FLRRFDL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA