Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is nhaP
Identifier: 124025239
GI number: 124025239
Start: 478802
End: 480046
Strand: Direct
Name: nhaP
Synonym: NATL1_05281
Alternate gene names: NA
Gene position: 478802-480046 (Clockwise)
Preceding gene: 124025238
Following gene: 124025244
Centisome position: 25.68
GC content: 42.65
Gene sequence:
>1245_bases ATGACTCCTGAGCGACTGGGTTTGCTCTGGGGCATCACAGTTTTTTCTGGGGCGGGAGCAAGATTACTATCAGTGCTAAC AGGACTTCCTGGGGTGGTTTTGTTGTTGCTATCTGGCTTGTTGATTGGGAGATCAGGTCTTGGATTGGTTGAACCTTTAG ATCTAGGTAAGGGGTTGGAGACAATAGTTGGTTTGTTGGTAAGCCTTGTTTTGTTTGATGGTGGTTTGAATCTTCGATTT CCTGGAGGGGCAATCAAGTCAATAGTTCTAAGAATTTCCTCAATTAGATTAATTATTTCATTGGCAGCTGGCTTCTTTGC TGCACATTGGTTTGCAGGACTTGGTTGGTCAGTCGCAGGAGTTTATAGCGCGATTGTTCTTGCTACTGGGCCAACGGTTG TAACTCCTTTAGTTCGACAAATTCGACTTGCATCGCCGTTGAGTGATGTTCTTGAAGCTGAAGGTTTGATACTCGAACCT ATTGGAGCAGTGCTTGCACTTTTGTTGTTAGAGCTTGTTGTTGGAGATTTACATGGCTGGAGAGAGCTTTTTCTTGGTTT GCTTTCAAGGCTTGGAGGAGGAGTTTTAATTGGGTCACTCGCAGGTCTTTTCCTTTCAGAGGGTTTGAAGCGCTTACGTT CTGAGCCTTATATCGGGATCAGATTACAACTTACTCTTGGAGTAGTTTTTCTGCTTTATGGCGTATGTGAATGGTTGTTA CCTGAATCAGGATTGCCGGCATCTGTTGCTGCAGGATTTGTGGTAGGACAAAGACCTTCTACACAGGCGAATGAACTTGA TAAATTAATAAGAGAATTAGCTCAGTTAGCAATAACTATGCTTTTTCCTTTATTAGCTGCCGACGTTTCATGGGGTGAAT TGAGTCCCTTGGGCTGGGGAGGTATAACTTGCGTACTTTTTCTGATGATCATAGTGAGGCCAATAGCTGTATCGATAGCA ACTTATGGATTGCCTCTTGATAATAAACAAAGATTATTTCTTGGTTGGTTAGCTCCCCGTGGAATAGTGACTGCAGCAGT TGCTTCTTTGTTCTCCATTAGATTGGAGCAGGCAGGTGTTTTAGGGGCTGGAAAACTTCAGGGATTAGTCTTTTTGACAA TATTAATGACAGTAGGTATTCAAGGTTTAACAGCTCAACCATTGGCAAAAATGTTGGGTCTACTGGATGAAGATAAAGAT TTAGATAAGCCGACTAATTCGGGCTCTATCTTTACTGAATCTTGA
Upstream 100 bases:
>100_bases TACTCTATAAGAATATGTAAGTAAAATCATCTTATTAACTTATTTATTTTCTTAGGTAGATTTAATGGATACTCTCTTAT GTCTTCATTGCTAGTTATTT
Downstream 100 bases:
>100_bases GAGTAAAACCCAACTTTGAATTAAATCAGGACCATTGAGAGTTCCAAAAAGTGCAGCTCTAAGACTTTTCATAACAACAC CTTTTTTTACTTTGCAGCTT
Product: CPA1 family Na+/H+ antiporter
Products: NA
Alternate protein names: MjNhaP2 [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTPERLGLLWGITVFSGAGARLLSVLTGLPGVVLLLLSGLLIGRSGLGLVEPLDLGKGLETIVGLLVSLVLFDGGLNLRF PGGAIKSIVLRISSIRLIISLAAGFFAAHWFAGLGWSVAGVYSAIVLATGPTVVTPLVRQIRLASPLSDVLEAEGLILEP IGAVLALLLLELVVGDLHGWRELFLGLLSRLGGGVLIGSLAGLFLSEGLKRLRSEPYIGIRLQLTLGVVFLLYGVCEWLL PESGLPASVAAGFVVGQRPSTQANELDKLIRELAQLAITMLFPLLAADVSWGELSPLGWGGITCVLFLMIIVRPIAVSIA TYGLPLDNKQRLFLGWLAPRGIVTAAVASLFSIRLEQAGVLGAGKLQGLVFLTILMTVGIQGLTAQPLAKMLGLLDEDKD LDKPTNSGSIFTES
Sequences:
>Translated_414_residues MTPERLGLLWGITVFSGAGARLLSVLTGLPGVVLLLLSGLLIGRSGLGLVEPLDLGKGLETIVGLLVSLVLFDGGLNLRF PGGAIKSIVLRISSIRLIISLAAGFFAAHWFAGLGWSVAGVYSAIVLATGPTVVTPLVRQIRLASPLSDVLEAEGLILEP IGAVLALLLLELVVGDLHGWRELFLGLLSRLGGGVLIGSLAGLFLSEGLKRLRSEPYIGIRLQLTLGVVFLLYGVCEWLL PESGLPASVAAGFVVGQRPSTQANELDKLIRELAQLAITMLFPLLAADVSWGELSPLGWGGITCVLFLMIIVRPIAVSIA TYGLPLDNKQRLFLGWLAPRGIVTAAVASLFSIRLEQAGVLGAGKLQGLVFLTILMTVGIQGLTAQPLAKMLGLLDEDKD LDKPTNSGSIFTES >Mature_413_residues TPERLGLLWGITVFSGAGARLLSVLTGLPGVVLLLLSGLLIGRSGLGLVEPLDLGKGLETIVGLLVSLVLFDGGLNLRFP GGAIKSIVLRISSIRLIISLAAGFFAAHWFAGLGWSVAGVYSAIVLATGPTVVTPLVRQIRLASPLSDVLEAEGLILEPI GAVLALLLLELVVGDLHGWRELFLGLLSRLGGGVLIGSLAGLFLSEGLKRLRSEPYIGIRLQLTLGVVFLLYGVCEWLLP ESGLPASVAAGFVVGQRPSTQANELDKLIRELAQLAITMLFPLLAADVSWGELSPLGWGGITCVLFLMIIVRPIAVSIAT YGLPLDNKQRLFLGWLAPRGIVTAAVASLFSIRLEQAGVLGAGKLQGLVFLTILMTVGIQGLTAQPLAKMLGLLDEDKDL DKPTNSGSIFTES
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 43525; Mature: 43393
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPERLGLLWGITVFSGAGARLLSVLTGLPGVVLLLLSGLLIGRSGLGLVEPLDLGKGLE CCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHH TIVGLLVSLVLFDGGLNLRFPGGAIKSIVLRISSIRLIISLAAGFFAAHWFAGLGWSVAG HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VYSAIVLATGPTVVTPLVRQIRLASPLSDVLEAEGLILEPIGAVLALLLLELVVGDLHGW HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH RELFLGLLSRLGGGVLIGSLAGLFLSEGLKRLRSEPYIGIRLQLTLGVVFLLYGVCEWLL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC PESGLPASVAAGFVVGQRPSTQANELDKLIRELAQLAITMLFPLLAADVSWGELSPLGWG CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GITCVLFLMIIVRPIAVSIATYGLPLDNKQRLFLGWLAPRGIVTAAVASLFSIRLEQAGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC LGAGKLQGLVFLTILMTVGIQGLTAQPLAKMLGLLDEDKDLDKPTNSGSIFTES CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure TPERLGLLWGITVFSGAGARLLSVLTGLPGVVLLLLSGLLIGRSGLGLVEPLDLGKGLE CCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHH TIVGLLVSLVLFDGGLNLRFPGGAIKSIVLRISSIRLIISLAAGFFAAHWFAGLGWSVAG HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VYSAIVLATGPTVVTPLVRQIRLASPLSDVLEAEGLILEPIGAVLALLLLELVVGDLHGW HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH RELFLGLLSRLGGGVLIGSLAGLFLSEGLKRLRSEPYIGIRLQLTLGVVFLLYGVCEWLL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC PESGLPASVAAGFVVGQRPSTQANELDKLIRELAQLAITMLFPLLAADVSWGELSPLGWG CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GITCVLFLMIIVRPIAVSIATYGLPLDNKQRLFLGWLAPRGIVTAAVASLFSIRLEQAGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC LGAGKLQGLVFLTILMTVGIQGLTAQPLAKMLGLLDEDKDLDKPTNSGSIFTES CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]