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The map label for this gene is ypjH [H]

Identifier: 124025162

GI number: 124025162

Start: 410307

End: 411581

Strand: Reverse

Name: ypjH [H]

Synonym: NATL1_04491

Alternate gene names: 124025162

Gene position: 411581-410307 (Counterclockwise)

Preceding gene: 124025163

Following gene: 124025155

Centisome position: 22.07

GC content: 39.14

Gene sequence:

>1275_bases
TTGACCCATATCGCCTGGCTAGGCAAAAAAACACCTTTTTGCGGGAATGTCTGTTACGGACTTACCACGACTGAAGAGCT
TAGAGAAAGAGGATATCAAACAAGTTTTATTCACTTTGACAACCCGATGAGAGATGGGAATAATAAAACCTCCTTGCTAG
CCAATGATCCTGATGTAAGTCTTCCTTATTTAATTAAATCTCAGGTTTACACAATTCCTTCTCTAAATGCGCAAAGAGAG
CTTAGAGAATCGCTCTCAAGACTGAAACCTGATTTAGTTCATGCAAGTCTTACTCTTTCTCCATTGGATTTTCGACTACC
TGAGCTTTGTCATCAACTTAATTTACCTTTGATAGCAACTTTTCACCCAGCTTTCGATTCAAAGCTCAGAAATCTTACTG
CCAATACACAGCAACTTACCTACCAACTTTATGCTCCATCATTAGCTAAGTATGACAAAGTAATTGTTTTTTCAGATTTG
CAAGCAGAGGTTCTCGCAAAACTAGGAGTAAAAGAGAGCAGACTAGAAGTAATACCTAATGGAATTGACATAAAGAAATG
GAACACGCTTAAACCAAATAATTCACAAAATGAACTTCATTTCGAAATAAAGAAAAAGCTTGGTTCTGAGAGAATATTTA
TCTATATGGGCAGAATAGCTTCTGAAAAAAATGTTGAAGCTCTACTACGTGCATGGAGATTTGTCCAGCCAAAAGGATGT
CGATTAGTAATAGTGGGAGATGGTCCACTAAGGCCAACACTCGAAAATCATTCAATTTTCAACAAAGAAGATAATGTTTT
TTGGTGGGGATACGAAGCTGATCAGAATAAAAGAGTCGCTCTTCTTCAAATCGCTGAGGTCTTTTTACTTCCAAGTCTTG
TAGAAGGATTATCTATTGCCTTGTTGGAAGCTATGGCAACAGGAACAGCATGTGTCGCGACAGATGCTGGAGCAGATGGA
GAAGTGCTTGAAAATGGAGCAGGAATCATACTTAACACTGAGGGTGTAACGTCTCAATTAAGGACTCTTTTACCTGTTTT
GCACGATCAGCCAGTGCTTACCCACGAACTAGGTAGACGTGCACGCTTAAGAGTAGAAGAAAAATATACACTTCAACAAA
ATATTGACTCACTTGAAAATCTATATGCAAACGTACTTAGATCATCTAGGTCGAAACTTCCTCAGCCAATTGACGACTCT
TCTGCGCTGCCAAAACAACTGCTTCAATTAAGGCGGATCTCAAGCCAGAAAGTTCAAGGTGTCGAAGAGCACTAA

Upstream 100 bases:

>100_bases
TAGTTAAAAAATTTTTATTTTGTAAATTATTTAACTATTAACAATAGTTTGAGAAGAAATAAACGATAGCTGCTAGTTTG
AAATACCGGTTTTTTAGAGT

Downstream 100 bases:

>100_bases
TCGTAGTACCTGCAGGAGAGGCAACCATATCTTTTAGTTCAGCAGGGTGTAAATTCTTTTCTCTTAGTAGAGATGCAGTA
CCTGAAAGAGTTCTATGAGC

Product: putative glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTHIAWLGKKTPFCGNVCYGLTTTEELRERGYQTSFIHFDNPMRDGNNKTSLLANDPDVSLPYLIKSQVYTIPSLNAQRE
LRESLSRLKPDLVHASLTLSPLDFRLPELCHQLNLPLIATFHPAFDSKLRNLTANTQQLTYQLYAPSLAKYDKVIVFSDL
QAEVLAKLGVKESRLEVIPNGIDIKKWNTLKPNNSQNELHFEIKKKLGSERIFIYMGRIASEKNVEALLRAWRFVQPKGC
RLVIVGDGPLRPTLENHSIFNKEDNVFWWGYEADQNKRVALLQIAEVFLLPSLVEGLSIALLEAMATGTACVATDAGADG
EVLENGAGIILNTEGVTSQLRTLLPVLHDQPVLTHELGRRARLRVEEKYTLQQNIDSLENLYANVLRSSRSKLPQPIDDS
SALPKQLLQLRRISSQKVQGVEEH

Sequences:

>Translated_424_residues
MTHIAWLGKKTPFCGNVCYGLTTTEELRERGYQTSFIHFDNPMRDGNNKTSLLANDPDVSLPYLIKSQVYTIPSLNAQRE
LRESLSRLKPDLVHASLTLSPLDFRLPELCHQLNLPLIATFHPAFDSKLRNLTANTQQLTYQLYAPSLAKYDKVIVFSDL
QAEVLAKLGVKESRLEVIPNGIDIKKWNTLKPNNSQNELHFEIKKKLGSERIFIYMGRIASEKNVEALLRAWRFVQPKGC
RLVIVGDGPLRPTLENHSIFNKEDNVFWWGYEADQNKRVALLQIAEVFLLPSLVEGLSIALLEAMATGTACVATDAGADG
EVLENGAGIILNTEGVTSQLRTLLPVLHDQPVLTHELGRRARLRVEEKYTLQQNIDSLENLYANVLRSSRSKLPQPIDDS
SALPKQLLQLRRISSQKVQGVEEH
>Mature_423_residues
THIAWLGKKTPFCGNVCYGLTTTEELRERGYQTSFIHFDNPMRDGNNKTSLLANDPDVSLPYLIKSQVYTIPSLNAQREL
RESLSRLKPDLVHASLTLSPLDFRLPELCHQLNLPLIATFHPAFDSKLRNLTANTQQLTYQLYAPSLAKYDKVIVFSDLQ
AEVLAKLGVKESRLEVIPNGIDIKKWNTLKPNNSQNELHFEIKKKLGSERIFIYMGRIASEKNVEALLRAWRFVQPKGCR
LVIVGDGPLRPTLENHSIFNKEDNVFWWGYEADQNKRVALLQIAEVFLLPSLVEGLSIALLEAMATGTACVATDAGADGE
VLENGAGIILNTEGVTSQLRTLLPVLHDQPVLTHELGRRARLRVEEKYTLQQNIDSLENLYANVLRSSRSKLPQPIDDSS
ALPKQLLQLRRISSQKVQGVEEH

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 47752; Mature: 47621

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHIAWLGKKTPFCGNVCYGLTTTEELRERGYQTSFIHFDNPMRDGNNKTSLLANDPDVS
CCCEEECCCCCCCCCCEEECCCCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC
LPYLIKSQVYTIPSLNAQRELRESLSRLKPDLVHASLTLSPLDFRLPELCHQLNLPLIAT
CCHHHHCCEEECCCCCHHHHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCEEEE
FHPAFDSKLRNLTANTQQLTYQLYAPSLAKYDKVIVFSDLQAEVLAKLGVKESRLEVIPN
ECCHHHHHHHHCCCCHHHEEEEEECCCHHCCCEEEEEECHHHHHHHHCCCCCCHHHCCCC
GIDIKKWNTLKPNNSQNELHFEIKKKLGSERIFIYMGRIASEKNVEALLRAWRFVQPKGC
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCC
RLVIVGDGPLRPTLENHSIFNKEDNVFWWGYEADQNKRVALLQIAEVFLLPSLVEGLSIA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLEAMATGTACVATDAGADGEVLENGAGIILNTEGVTSQLRTLLPVLHDQPVLTHELGRR
HHHHHHCCCEEEEECCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCH
ARLRVEEKYTLQQNIDSLENLYANVLRSSRSKLPQPIDDSSALPKQLLQLRRISSQKVQG
HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
VEEH
CCCC
>Mature Secondary Structure 
THIAWLGKKTPFCGNVCYGLTTTEELRERGYQTSFIHFDNPMRDGNNKTSLLANDPDVS
CCEEECCCCCCCCCCEEECCCCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC
LPYLIKSQVYTIPSLNAQRELRESLSRLKPDLVHASLTLSPLDFRLPELCHQLNLPLIAT
CCHHHHCCEEECCCCCHHHHHHHHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCEEEE
FHPAFDSKLRNLTANTQQLTYQLYAPSLAKYDKVIVFSDLQAEVLAKLGVKESRLEVIPN
ECCHHHHHHHHCCCCHHHEEEEEECCCHHCCCEEEEEECHHHHHHHHCCCCCCHHHCCCC
GIDIKKWNTLKPNNSQNELHFEIKKKLGSERIFIYMGRIASEKNVEALLRAWRFVQPKGC
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCC
RLVIVGDGPLRPTLENHSIFNKEDNVFWWGYEADQNKRVALLQIAEVFLLPSLVEGLSIA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLEAMATGTACVATDAGADGEVLENGAGIILNTEGVTSQLRTLLPVLHDQPVLTHELGRR
HHHHHHCCCEEEEECCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCH
ARLRVEEKYTLQQNIDSLENLYANVLRSSRSKLPQPIDDSSALPKQLLQLRRISSQKVQG
HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
VEEH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]