The gene/protein map for NC_008819 is currently unavailable.
Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025082

Identifier: 124025082

GI number: 124025082

Start: 342594

End: 343439

Strand: Reverse

Name: 124025082

Synonym: NATL1_03691

Alternate gene names: NA

Gene position: 343439-342594 (Counterclockwise)

Preceding gene: 124025083

Following gene: 124025080

Centisome position: 18.42

GC content: 30.97

Gene sequence:

>846_bases
ATGCGAAGAAGTTTACGAGATGCTTTTGTTGGCTTTTCACTATTAGGTGGGTTAGTTATCTTTTCAGGAGCAATGCTTTG
GTTAAGAGATTTTCGTTTAGGTTCTAAAACATGGGAAATATCTGCAAGCTTTAAAGATGCAAGTGGTCTTGCCAAGATGT
CTCCAGTTACTTATCGGGGAATCATTGTTGGATCTGTTCAAAAGATAAGTTTCACACCAAACACTGTTGAAACTAAAATA
AAATTAAATAACGATAATCTAATTTTACCAAAACCTGTAATTGCCAAAATCGTCACAAGTTCTATGCTTGGAGGAGATGC
TCAATTATCTTTAATATCACTAGGCAAATCATTAAATAAAAATGAACTAATTAAAGTAAATAAAGATTGTCCTAGAAAAA
GAATCTTATGTAATGGAGCTGAAATTAAAGGTGTTGAAATGGTTAGCATATCAAGCTTGACAGAGGGTATAAATGGAATT
ATTAATGAAGCTGATAAACAAGCAATAGTAAATAAAGTATCTGAATCTATTCAACAATTTGATCGTACTCAAGCTAATCT
TGACGAACTTGTCTTGTTATCCAAATCAGAACTTATAAGAGTAAAGCCTATAATTTCTGAACTAACAAAAGCTTCTTTTC
ATTTAAATAATATTCTTGAAAGCCTAGACAATCCTGAGACTTTAAAAGATATTCAGGAACTTGCCTCAACATCTAGTTCT
CTAACAAAGAAAATTGATCAAATGAGCTCAGATATGGGAAATATTATGGAAGACAAAGAACTTATAAATGCTCTAAAAAA
GGTAACCATTGGTTTAAGTAAATTATTTGATGATATATATCCTTAA

Upstream 100 bases:

>100_bases
GGATCTATAGATCAATTTAAACAAAGTGAAAATACCTATGTGAAACAATTTCGCACAGGCAATCTTAAAGGACCAATGCA
ACCTAAGGACTCATAAATTT

Downstream 100 bases:

>100_bases
AAAAACAAGTTTCAGGTAACGCTATTAATCGCATCCATTGCAATTGAAGCAATAGCCTTATCACTTGCCTTAGGTAATTG
AACATATTTACCTCCGGATG

Product: putative ABC transporter

Products: NA

Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain Protein; ABC-Type Transport System Periplasmic Component; Mammalian Cell Entry Related Domain-Containing Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDFRLGSKTWEISASFKDASGLAKMSPVTYRGIIVGSVQKISFTPNTVETKI
KLNNDNLILPKPVIAKIVTSSMLGGDAQLSLISLGKSLNKNELIKVNKDCPRKRILCNGAEIKGVEMVSISSLTEGINGI
INEADKQAIVNKVSESIQQFDRTQANLDELVLLSKSELIRVKPIISELTKASFHLNNILESLDNPETLKDIQELASTSSS
LTKKIDQMSSDMGNIMEDKELINALKKVTIGLSKLFDDIYP

Sequences:

>Translated_281_residues
MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDFRLGSKTWEISASFKDASGLAKMSPVTYRGIIVGSVQKISFTPNTVETKI
KLNNDNLILPKPVIAKIVTSSMLGGDAQLSLISLGKSLNKNELIKVNKDCPRKRILCNGAEIKGVEMVSISSLTEGINGI
INEADKQAIVNKVSESIQQFDRTQANLDELVLLSKSELIRVKPIISELTKASFHLNNILESLDNPETLKDIQELASTSSS
LTKKIDQMSSDMGNIMEDKELINALKKVTIGLSKLFDDIYP
>Mature_281_residues
MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDFRLGSKTWEISASFKDASGLAKMSPVTYRGIIVGSVQKISFTPNTVETKI
KLNNDNLILPKPVIAKIVTSSMLGGDAQLSLISLGKSLNKNELIKVNKDCPRKRILCNGAEIKGVEMVSISSLTEGINGI
INEADKQAIVNKVSESIQQFDRTQANLDELVLLSKSELIRVKPIISELTKASFHLNNILESLDNPETLKDIQELASTSSS
LTKKIDQMSSDMGNIMEDKELINALKKVTIGLSKLFDDIYP

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30872; Mature: 30872

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDFRLGSKTWEISASFKDASGLAKMSPVTYRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCCEEEE
IIVGSVQKISFTPNTVETKIKLNNDNLILPKPVIAKIVTSSMLGGDAQLSLISLGKSLNK
EEEECCEEEEECCCCEEEEEEECCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
NELIKVNKDCPRKRILCNGAEIKGVEMVSISSLTEGINGIINEADKQAIVNKVSESIQQF
CCEEEECCCCCCHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTQANLDELVLLSKSELIRVKPIISELTKASFHLNNILESLDNPETLKDIQELASTSSS
HHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LTKKIDQMSSDMGNIMEDKELINALKKVTIGLSKLFDDIYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDFRLGSKTWEISASFKDASGLAKMSPVTYRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCCCCEEEE
IIVGSVQKISFTPNTVETKIKLNNDNLILPKPVIAKIVTSSMLGGDAQLSLISLGKSLNK
EEEECCEEEEECCCCEEEEEEECCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
NELIKVNKDCPRKRILCNGAEIKGVEMVSISSLTEGINGIINEADKQAIVNKVSESIQQF
CCEEEECCCCCCHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTQANLDELVLLSKSELIRVKPIISELTKASFHLNNILESLDNPETLKDIQELASTSSS
HHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LTKKIDQMSSDMGNIMEDKELINALKKVTIGLSKLFDDIYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA