| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is hisB
Identifier: 124025074
GI number: 124025074
Start: 334306
End: 334917
Strand: Reverse
Name: hisB
Synonym: NATL1_03611
Alternate gene names: 124025074
Gene position: 334917-334306 (Counterclockwise)
Preceding gene: 124025075
Following gene: 124025073
Centisome position: 17.96
GC content: 38.4
Gene sequence:
>612_bases ATGGAAAAAACTAGAGAAGGAGAGATTAGACGGGAAACTAAGGAAACTGACGTTTTTGTGAAAATTGATCTTGATGGTTC TGGAAAATGCAGTGCAAATACGGGGATTGGTTTTCTAGACCATATGATCCAACAATTATCTAGTCATGGATTATTTGATA TTGAAGTAAGAGCTAATGGAGATACTCACATAGACGATCATCACACCAATGAGGATGTTGGAATTGCTATTGGACAAGCT TTGTCAAAAGCATTAGGTGATCGAGTTGGAATCAAACGTTTTGGTCATTTTTTAGCTCCGCTTGATGAAGCTCTTATTCA GGTTGTGGTTGATTGCTCCGGTCGACCACATTTAAGTTTTAGTTTAGATATTCCTTCTCAAAAAGTGGGCACTTATGATA CGGAATTGGTTAAAGAATTTTTTGGTGCTGTTGTGAGTAATGGTGGTTTAACTCTCCACATCAGACAACTGGCAGGAAAT AATACTCACCACATAATTGAGGCTACTTTCAAATCGTTTGCAAGAGCCCTTAGGATGGCTACTGAAATTGACCCTAGAAG ATCAAGTCAAATTCCAAGCAGTAAAGGAGTTCTTGAACAGGCTGGTCAATAA
Upstream 100 bases:
>100_bases GATCTTTCAAGTGGTATATCAGGACAAACTGTTTATGTTGATGCAGGTTATTGCATCAATGGAATGTAATTTCAAGCCAA CTTAAAATTGCCAATTAAAT
Downstream 100 bases:
>100_bases AAACTCCATATTTAAATAAATCATTTGAGCTTGAACTCGCAAAAGTGAGAAGTTTAAGCGAAAATCAAGTTTGAATTCAA GAAAAATAATGGCAGTTAGT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQA LSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGN NTHHIIEATFKSFARALRMATEIDPRRSSQIPSSKGVLEQAGQ
Sequences:
>Translated_203_residues MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQA LSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGN NTHHIIEATFKSFARALRMATEIDPRRSSQIPSSKGVLEQAGQ >Mature_203_residues MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQA LSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGN NTHHIIEATFKSFARALRMATEIDPRRSSQIPSSKGVLEQAGQ
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=196, Percent_Identity=45.4081632653061, Blast_Score=181, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324776, Length=168, Percent_Identity=47.6190476190476, Blast_Score=154, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PROM1 (A2C0B5)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014190.1 - ProteinModelPortal: A2C0B5 - SMR: A2C0B5 - STRING: A2C0B5 - GeneID: 4781280 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_03611 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: PRK00951 - BioCyc: PMAR167555:NATL1_03611-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22187; Mature: 22187
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANG CCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC DTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGNNTHHIIEATFKSFARALRMA EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDPRRSSQIPSSKGVLEQAGQ HHCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANG CCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC DTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAGNNTHHIIEATFKSFARALRMA EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDPRRSSQIPSSKGVLEQAGQ HHCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA