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The map label for this gene is 124027704

Identifier: 124027704

GI number: 124027704

Start: 824087

End: 824506

Strand: Reverse

Name: 124027704

Synonym: Hbut_0827

Alternate gene names: NA

Gene position: 824506-824087 (Counterclockwise)

Preceding gene: 124027705

Following gene: 124027702

Centisome position: 49.46

GC content: 56.9

Gene sequence:

>420_bases
ATGCGTAGCCAGAAGGAAACCCCCGTAAAAATATCAGAGCTTAAACCCGGAATGGATAACGTAACAGTCCGAGTCCGTGT
TTTAGAAGCCGAAGCTCCCAGAGTCATAGAGACACGTAGGGGTCCACGTACGATAAGCGAGGCGGTGGTAGGCGACGAGA
CAGGTAGGGTGAAGCTAACACTCTGGGGTCGTGCAGCCGGTACATTGTCGGAGGGTGAGGCTGTCGAGATCCAGGGCGCC
TGGACAACTAATTATCGGGGCAACGTAGTCCTCAATGTTGGAGGTCGTGGCGGAATACGCAGACTCGACGATAGCGAAGC
TCCTCAGCCCGAAGAAGTACCCGAGGAGACCCCTAAGGCGTCATGGCAGCGCCGGGGTCGGAGAAGGCTCGGTGAGTTCC
AGCGTCGCCAGCGCTACTAA

Upstream 100 bases:

>100_bases
AAGCACAGGCCAGCATCATCACAGCCAACTGGTCCGGCAGGGATATAAGCCTCTGAGAGCCAGTACATACTCGTTTAGCG
TAGCTGGAGTCGATGTATCC

Downstream 100 bases:

>100_bases
CTGCAGCGAGAATCTCTAACCATCACGCGTTCGGCAGTGCAAAGACGAGGTTTTTAGGAAAATCAAGTCTTCTTCATGGC
TGGTTATTCGCCAACCTCAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRSQKETPVKISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRTISEAVVGDETGRVKLTLWGRAAGTLSEGEAVEIQGA
WTTNYRGNVVLNVGGRGGIRRLDDSEAPQPEEVPEETPKASWQRRGRRRLGEFQRRQRY

Sequences:

>Translated_139_residues
MRSQKETPVKISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRTISEAVVGDETGRVKLTLWGRAAGTLSEGEAVEIQGA
WTTNYRGNVVLNVGGRGGIRRLDDSEAPQPEEVPEETPKASWQRRGRRRLGEFQRRQRY
>Mature_139_residues
MRSQKETPVKISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRTISEAVVGDETGRVKLTLWGRAAGTLSEGEAVEIQGA
WTTNYRGNVVLNVGGRGGIRRLDDSEAPQPEEVPEETPKASWQRRGRRRLGEFQRRQRY

Specific function: Unknown

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15650; Mature: 15650

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSQKETPVKISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRTISEAVVGDETGRVKLT
CCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEE
LWGRAAGTLSEGEAVEIQGAWTTNYRGNVVLNVGGRGGIRRLDDSEAPQPEEVPEETPKA
EECCCCCCCCCCCEEEEEECEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
SWQRRGRRRLGEFQRRQRY
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSQKETPVKISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRTISEAVVGDETGRVKLT
CCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEE
LWGRAAGTLSEGEAVEIQGAWTTNYRGNVVLNVGGRGGIRRLDDSEAPQPEEVPEETPKA
EECCCCCCCCCCCEEEEEECEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
SWQRRGRRRLGEFQRRQRY
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA