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The map label for this gene is 124027589

Identifier: 124027589

GI number: 124027589

Start: 688803

End: 690209

Strand: Reverse

Name: 124027589

Synonym: Hbut_0709

Alternate gene names: NA

Gene position: 690209-688803 (Counterclockwise)

Preceding gene: 124027597

Following gene: 124027588

Centisome position: 41.4

GC content: 47.62

Gene sequence:

>1407_bases
ATGAGAGGCGAAATCCTAGCGGTCGCCCCATGGGGGGATCCTGCGGGTTGGACCTACACAAGGTACCGACTTAAAGCTGG
CGGAAAAACTGTTGAGGTAGAATCTTTCACCGGGCTGGCAGCAGTAGCCAAGGCTTACCCTGAAGCCCGCATACTGATAG
TGGCCGCCGACACCCTAGCAGACCCCGCCTTCACCCTTACAGGCTACGAGGACGTTATAGACTCTGCTAGGAGGTATGTG
AAGAATTACCTCTGCCAGCTCCAAGGCAAGGCTGAGGTACACATACTCCCAGGAGTGATAGCCCAGAAGCACCGGGTCTT
CAGGGGCAAGCCGACAGACTACTATTACAAGCTCCTAGACACCCTCATAAAACCAGCATGGGAGGGAGAAACCGTCAAGG
CGATAGTACTAGATTTAACCCACGGGATAAACTACATGCCCTCAACAGCCCTCAAAGCAGTCGAGGAAGTTGCAGCCCTA
CACGCCCTAGCAGCATCACTAAAACACTCCAAAGCAGAAACCGTAAAGGTCGAAGTCTACAATAGCGACCCCATAATACT
CCCAGCCGACGAGCGGAAAAAACTGGCCAGAAACCGCCAATATCCCTGCAAACCAGCAGCAAGCATTGAACCCCCCACAG
CAACCATACACCTCATAATGGCGAGGCGCTACACAACACTAGACCTAATCTCAAACATAGACAGTCTAATCAACACAGCA
GAAAAGACGCCCGTAAAACCGACAAGCAGAGAATGCACCATAGGCCGCGACGAGAAACAAGAGCTTGATGAAGCAGTAGA
CGAGGCACTTAAACTACTCAAAATGTTGAGATACGGCCTCATACCCCAACTAGTTTACTACACAGCAAAATACGCTGCAA
AGCTGCTCGAAAAACTCAAACAAGCATACAACACTACAGAGAAGCTATGGCATGAAGGAATAACCGTAAAGAAGACACCG
GAAAAACTAGAGGTCACAAGATGCCGCCAGCTCACAGAAGCATATAAGACAATCCTCTACACCTATACAATAGCAAAAAT
CCTTGAGGAAGAACTAATAGACACAACCACCCCAACACTAAACCAGGCGGAAAAGCTCAGAGAAACACTAAGACACACGG
CAATAATAGAATCCATACAAAGCAGGGAGATAAGCAAGCTCAAAAAGAAGCTCAAAGCCAACCTAATCCCAACAGAGTGG
ACACCCCTAGCAACAGTATATCAAATGCAACAACAGGAATGCAAGGACAAAAGCATCCTCACAAGAGACCTACTAGCACA
CGGAGGCTGGCACACAGACATAATAGAAGTCAAGAAACAAGACAACACAGTAGCATTCAAAGTAAAAGAAGAATATAAAT
GCCAAAACAGGAACATATGGCAAATAATAGAAGAACTCGGAACATAA

Upstream 100 bases:

>100_bases
GCTATGCAAAACGCAAAGCCCATGCAGCAAACCCACACCACACAAAGCCAAGCTGCTAAGGCTGGTATAGCGCTGGCAGC
CCCGCGCGGGGCCCAGGGCT

Downstream 100 bases:

>100_bases
AATACAGCAAGACGTCTAACACGCTATACCAGAGTACATAAAACTCATCACTCTTTTCAACACCTATTGCATACCCATCA
GTTATATAGAACTTTTATGC

Product: DNA repair enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MRGEILAVAPWGDPAGWTYTRYRLKAGGKTVEVESFTGLAAVAKAYPEARILIVAADTLADPAFTLTGYEDVIDSARRYV
KNYLCQLQGKAEVHILPGVIAQKHRVFRGKPTDYYYKLLDTLIKPAWEGETVKAIVLDLTHGINYMPSTALKAVEEVAAL
HALAASLKHSKAETVKVEVYNSDPIILPADERKKLARNRQYPCKPAASIEPPTATIHLIMARRYTTLDLISNIDSLINTA
EKTPVKPTSRECTIGRDEKQELDEAVDEALKLLKMLRYGLIPQLVYYTAKYAAKLLEKLKQAYNTTEKLWHEGITVKKTP
EKLEVTRCRQLTEAYKTILYTYTIAKILEEELIDTTTPTLNQAEKLRETLRHTAIIESIQSREISKLKKKLKANLIPTEW
TPLATVYQMQQQECKDKSILTRDLLAHGGWHTDIIEVKKQDNTVAFKVKEEYKCQNRNIWQIIEELGT

Sequences:

>Translated_468_residues
MRGEILAVAPWGDPAGWTYTRYRLKAGGKTVEVESFTGLAAVAKAYPEARILIVAADTLADPAFTLTGYEDVIDSARRYV
KNYLCQLQGKAEVHILPGVIAQKHRVFRGKPTDYYYKLLDTLIKPAWEGETVKAIVLDLTHGINYMPSTALKAVEEVAAL
HALAASLKHSKAETVKVEVYNSDPIILPADERKKLARNRQYPCKPAASIEPPTATIHLIMARRYTTLDLISNIDSLINTA
EKTPVKPTSRECTIGRDEKQELDEAVDEALKLLKMLRYGLIPQLVYYTAKYAAKLLEKLKQAYNTTEKLWHEGITVKKTP
EKLEVTRCRQLTEAYKTILYTYTIAKILEEELIDTTTPTLNQAEKLRETLRHTAIIESIQSREISKLKKKLKANLIPTEW
TPLATVYQMQQQECKDKSILTRDLLAHGGWHTDIIEVKKQDNTVAFKVKEEYKCQNRNIWQIIEELGT
>Mature_468_residues
MRGEILAVAPWGDPAGWTYTRYRLKAGGKTVEVESFTGLAAVAKAYPEARILIVAADTLADPAFTLTGYEDVIDSARRYV
KNYLCQLQGKAEVHILPGVIAQKHRVFRGKPTDYYYKLLDTLIKPAWEGETVKAIVLDLTHGINYMPSTALKAVEEVAAL
HALAASLKHSKAETVKVEVYNSDPIILPADERKKLARNRQYPCKPAASIEPPTATIHLIMARRYTTLDLISNIDSLINTA
EKTPVKPTSRECTIGRDEKQELDEAVDEALKLLKMLRYGLIPQLVYYTAKYAAKLLEKLKQAYNTTEKLWHEGITVKKTP
EKLEVTRCRQLTEAYKTILYTYTIAKILEEELIDTTTPTLNQAEKLRETLRHTAIIESIQSREISKLKKKLKANLIPTEW
TPLATVYQMQQQECKDKSILTRDLLAHGGWHTDIIEVKKQDNTVAFKVKEEYKCQNRNIWQIIEELGT

Specific function: Unknown

COG id: COG1517

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019016
- InterPro:   IPR013383
- InterPro:   IPR010171 [H]

Pfam domain/function: PF09455 Cas_DxTHG [H]

EC number: NA

Molecular weight: Translated: 53068; Mature: 53068

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGEILAVAPWGDPAGWTYTRYRLKAGGKTVEVESFTGLAAVAKAYPEARILIVAADTLA
CCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCC
DPAFTLTGYEDVIDSARRYVKNYLCQLQGKAEVHILPGVIAQKHRVFRGKPTDYYYKLLD
CCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHH
TLIKPAWEGETVKAIVLDLTHGINYMPSTALKAVEEVAALHALAASLKHSKAETVKVEVY
HHHCCCCCCCCHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NSDPIILPADERKKLARNRQYPCKPAASIEPPTATIHLIMARRYTTLDLISNIDSLINTA
CCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHH
EKTPVKPTSRECTIGRDEKQELDEAVDEALKLLKMLRYGLIPQLVYYTAKYAAKLLEKLK
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAYNTTEKLWHEGITVKKTPEKLEVTRCRQLTEAYKTILYTYTIAKILEEELIDTTTPTL
HHHCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NQAEKLRETLRHTAIIESIQSREISKLKKKLKANLIPTEWTPLATVYQMQQQECKDKSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRDLLAHGGWHTDIIEVKKQDNTVAFKVKEEYKCQNRNIWQIIEELGT
HHHHHHCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRGEILAVAPWGDPAGWTYTRYRLKAGGKTVEVESFTGLAAVAKAYPEARILIVAADTLA
CCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEEEEECCCC
DPAFTLTGYEDVIDSARRYVKNYLCQLQGKAEVHILPGVIAQKHRVFRGKPTDYYYKLLD
CCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHH
TLIKPAWEGETVKAIVLDLTHGINYMPSTALKAVEEVAALHALAASLKHSKAETVKVEVY
HHHCCCCCCCCHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
NSDPIILPADERKKLARNRQYPCKPAASIEPPTATIHLIMARRYTTLDLISNIDSLINTA
CCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHH
EKTPVKPTSRECTIGRDEKQELDEAVDEALKLLKMLRYGLIPQLVYYTAKYAAKLLEKLK
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAYNTTEKLWHEGITVKKTPEKLEVTRCRQLTEAYKTILYTYTIAKILEEELIDTTTPTL
HHHCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NQAEKLRETLRHTAIIESIQSREISKLKKKLKANLIPTEWTPLATVYQMQQQECKDKSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRDLLAHGGWHTDIIEVKKQDNTVAFKVKEEYKCQNRNIWQIIEELGT
HHHHHHCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]