Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is hisB [H]
Identifier: 123965549
GI number: 123965549
Start: 290512
End: 291117
Strand: Reverse
Name: hisB [H]
Synonym: P9515_03141
Alternate gene names: 123965549
Gene position: 291117-290512 (Counterclockwise)
Preceding gene: 123965550
Following gene: 123965548
Centisome position: 17.08
GC content: 33.5
Gene sequence:
>606_bases ATGTCATCCTCAAGACAAGCTGAAATTAAAAGAAAAACAAATGAAACAGATATTAGTATTTTTATTAATATAGATGGCAA CGGAATTTCAGAAATTGATACAGGGATACCCTTCTTAGATCATATGCTTCATCAAATATCAAGTCACGGATTATTTGATT TAAAAATAAGAGCTATAGGAGATACACACATTGATGATCATCATACAAATGAGGATGTCGGAATTGCCCTTGGTAAAGCA TTTACCAAAGCCCTTGGAGAAAGAAAGGGGATAAACAGATTTGGGCATTTTTTTGCACCTTTAGATGAGGCTTTAGTTCA AGTGACCTTAGATTGTTCAGGAAGGCCTCATTTATCTTATGGTCTCAAATTGAAAGCACCAAGAATAGGAAATTATGATA CTGAATTAGTAAGAGAATTTTTTATAGCTTTTGTTAACAGTAGTGGAATAACCCTTCATATCAACCAAATAGAAGGGAGA AATTCTCATCATATAGTTGAGGCATGTTTTAAAGCCTTTTCAAGATCAATGAGAATGGCTACTGAAATAGATTTAAGGAG ATCCGGAACTATCCCTAGTAGTAAAGGAATGCTAGAAATTGATTAG
Upstream 100 bases:
>100_bases TCTTTTGAGTGATCTTGCAAGTGGTATATCAGGCCAAACTATTTATGTTGATGCAGGTTATTGCATTAATGGAATGTAAA TTAAAATTTTAAAAACTAAA
Downstream 100 bases:
>100_bases CTATACAATTTAAGTATTTTTTTTAATAAGCCACAATTTTATAGATTTTTGGCGAAAATAAATAAAAATAAAACTTTAAA GTGACTTATATTCAAGACAA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKA FTKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSYGLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGR NSHHIVEACFKAFSRSMRMATEIDLRRSGTIPSSKGMLEID
Sequences:
>Translated_201_residues MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKA FTKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSYGLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGR NSHHIVEACFKAFSRSMRMATEIDLRRSGTIPSSKGMLEID >Mature_200_residues SSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKAF TKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSYGLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGRN SHHIVEACFKAFSRSMRMATEIDLRRSGTIPSSKGMLEID
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=46.9072164948454, Blast_Score=182, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324776, Length=220, Percent_Identity=39.5454545454545, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22403; Mature: 22272
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIG CCCCCCHHHHHCCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCEEEEEEEEEC DTHIDDHHTNEDVGIALGKAFTKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHEEEEECCCCCCCCEE GLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGRNSHHIVEACFKAFSRSMRMA CEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDLRRSGTIPSSKGMLEID HHHHHHCCCCCCCCCCCEEEC >Mature Secondary Structure SSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIG CCCCCHHHHHCCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCEEEEEEEEEC DTHIDDHHTNEDVGIALGKAFTKALGERKGINRFGHFFAPLDEALVQVTLDCSGRPHLSY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHEEEEECCCCCCCCEE GLKLKAPRIGNYDTELVREFFIAFVNSSGITLHINQIEGRNSHHIVEACFKAFSRSMRMA CEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDLRRSGTIPSSKGMLEID HHHHHHCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA