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The map label for this gene is 123965545

Identifier: 123965545

GI number: 123965545

Start: 285417

End: 286757

Strand: Reverse

Name: 123965545

Synonym: P9515_03101

Alternate gene names: NA

Gene position: 286757-285417 (Counterclockwise)

Preceding gene: 123965548

Following gene: 123965542

Centisome position: 16.83

GC content: 28.49

Gene sequence:

>1341_bases
TTGCATAAAATTTGGTCACCACATCTATCTATAGAAATAATTAATAGATACAAAAACTTTTATAAAATAAGTAATGGAGA
TTTATATACCGGAACAAAAGCATGTAAGAAGGGTTCACGCGGAGTAATTGGATTAAAAGCGAGATCAAAATTAACCAACA
ACATAAATGCAGAAATCCAACCTCAATTACTTAAAAAAGTAGTTGGACATAGCAAATGGGGAGATTACAAATATATTCCT
GTTATGTATAAGTTAGGCCATAGAACAACAAAAGAGCATCTATTTGATTTAGCCTTTTGTTCGATTTTATTAGAACCCTT
TCAAGAATCAAAAATTGAGGCGGGATTAGTAATTTCAAATTATTCAAATCAAATTAATATTGAAAGAATTGATTTAAACC
AACGATTAAGAAAAAAAGTATTAAGTACCTTTTTAAATTTAAACGAAACTCTAAAAAGATCTATTCCGGATATTACTGAA
GACAGAAAAAAATGTACGATATGTTCATGGCAGAAGTTTTGCGATACCGAAGCAAAAGATAATGGATATTTAACTGATAT
AGACGGTATCGGTTCTAAAACTGCTTTCCTTCTCCATAAAAGTGGGATCTCTAATATTAAAGAACTTGCTACTGCTCGAG
AAATAGATTTAGGAGAAAAACTGAATCAATTCAAAGATCAAAAGTTTGAAAAAGCTTCAAAGTTTATAAATCAATCAAAA
GCATATTTATCAGGAACACCAATTCGAATTTTTGAAAGTGATAACTTATCTTCTCTTTTATCAAAAAAAGATTCAGGATT
CTTTATGTTTGATATTGAGTCAAATCCGGATGAGAAGCATGATTTTTTATATGGATTTTTAAAAGTAAATAATTTATTTG
AAAATGTTAAAGATGATTTTTATGATCCAATATTAAACCTCAAAAAAAATTGCAAAAAATCAAATCAAGAAATTATTCAG
AAACTTTTGTCTGAAAAATCCTGGCCAGTTTTACATTATGGAGAAACTGAGAAAATAGCAATATTAAAATTAGCAAGGCA
ATTAAATCTTGATGTAAAAGAAATTGAGATCCTTAAGTCCCGATTCATAGACTTGCACTTAATAGTTAGAGGTTCATGGA
TATTACCGATTAGAAACTATAGTTTAAAAACAGTTGCCAATTGGATGGGATTCAAATGGAGACAAAAAAATGTAAGTGGA
TCAAAAGCTTTATATTGGTGGATACAATACAAAAATACTTTGAATGATCTTTTTTTAAAAAAGATTATTCAATACAATAG
AGATGACTGTATGGCTACACTTCAAATCGCAAAGTGGTTAATCAAAAAACGCAATTATTGA

Upstream 100 bases:

>100_bases
AAAATTTAAACTGCCTTTGCAAAAAAATTTGAATAATCTTTATTTAAAAAGTTTTATTAGATGCAAGAGAAAAGCTTGGC
TTGATTATCAGGGCAATAAG

Downstream 100 bases:

>100_bases
TTAAAGAAAAGTTGAACCTACAGATTTATCTATTGAAATTTGGCCAAATTTATCAGAAAAAAAAGAGTTTTCCTTATCCA
AGTATTTCCTCTTTATCAAT

Product: RecB family nuclease

Products: NA

Alternate protein names: RecB Family-Like Nuclease; Nuclease; Transposase IS; DNA Repair Protein; Nuclease-Like Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MHKIWSPHLSIEIINRYKNFYKISNGDLYTGTKACKKGSRGVIGLKARSKLTNNINAEIQPQLLKKVVGHSKWGDYKYIP
VMYKLGHRTTKEHLFDLAFCSILLEPFQESKIEAGLVISNYSNQINIERIDLNQRLRKKVLSTFLNLNETLKRSIPDITE
DRKKCTICSWQKFCDTEAKDNGYLTDIDGIGSKTAFLLHKSGISNIKELATAREIDLGEKLNQFKDQKFEKASKFINQSK
AYLSGTPIRIFESDNLSSLLSKKDSGFFMFDIESNPDEKHDFLYGFLKVNNLFENVKDDFYDPILNLKKNCKKSNQEIIQ
KLLSEKSWPVLHYGETEKIAILKLARQLNLDVKEIEILKSRFIDLHLIVRGSWILPIRNYSLKTVANWMGFKWRQKNVSG
SKALYWWIQYKNTLNDLFLKKIIQYNRDDCMATLQIAKWLIKKRNY

Sequences:

>Translated_446_residues
MHKIWSPHLSIEIINRYKNFYKISNGDLYTGTKACKKGSRGVIGLKARSKLTNNINAEIQPQLLKKVVGHSKWGDYKYIP
VMYKLGHRTTKEHLFDLAFCSILLEPFQESKIEAGLVISNYSNQINIERIDLNQRLRKKVLSTFLNLNETLKRSIPDITE
DRKKCTICSWQKFCDTEAKDNGYLTDIDGIGSKTAFLLHKSGISNIKELATAREIDLGEKLNQFKDQKFEKASKFINQSK
AYLSGTPIRIFESDNLSSLLSKKDSGFFMFDIESNPDEKHDFLYGFLKVNNLFENVKDDFYDPILNLKKNCKKSNQEIIQ
KLLSEKSWPVLHYGETEKIAILKLARQLNLDVKEIEILKSRFIDLHLIVRGSWILPIRNYSLKTVANWMGFKWRQKNVSG
SKALYWWIQYKNTLNDLFLKKIIQYNRDDCMATLQIAKWLIKKRNY
>Mature_446_residues
MHKIWSPHLSIEIINRYKNFYKISNGDLYTGTKACKKGSRGVIGLKARSKLTNNINAEIQPQLLKKVVGHSKWGDYKYIP
VMYKLGHRTTKEHLFDLAFCSILLEPFQESKIEAGLVISNYSNQINIERIDLNQRLRKKVLSTFLNLNETLKRSIPDITE
DRKKCTICSWQKFCDTEAKDNGYLTDIDGIGSKTAFLLHKSGISNIKELATAREIDLGEKLNQFKDQKFEKASKFINQSK
AYLSGTPIRIFESDNLSSLLSKKDSGFFMFDIESNPDEKHDFLYGFLKVNNLFENVKDDFYDPILNLKKNCKKSNQEIIQ
KLLSEKSWPVLHYGETEKIAILKLARQLNLDVKEIEILKSRFIDLHLIVRGSWILPIRNYSLKTVANWMGFKWRQKNVSG
SKALYWWIQYKNTLNDLFLKKIIQYNRDDCMATLQIAKWLIKKRNY

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52021; Mature: 52021

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIWSPHLSIEIINRYKNFYKISNGDLYTGTKACKKGSRGVIGLKARSKLTNNINAEIQ
CCCCCCCCCHHHHHHHHHHHEEECCCCEECCHHHHCCCCCCEEEEHHHHHHHCCCCCCCC
PQLLKKVVGHSKWGDYKYIPVMYKLGHRTTKEHLFDLAFCSILLEPFQESKIEAGLVISN
HHHHHHHHCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
YSNQINIERIDLNQRLRKKVLSTFLNLNETLKRSIPDITEDRKKCTICSWQKFCDTEAKD
CCCEEEEEEECHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCCCCC
NGYLTDIDGIGSKTAFLLHKSGISNIKELATAREIDLGEKLNQFKDQKFEKASKFINQSK
CCCEEECCCCCCCEEEEEEHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
AYLSGTPIRIFESDNLSSLLSKKDSGFFMFDIESNPDEKHDFLYGFLKVNNLFENVKDDF
HHCCCCCEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
YDPILNLKKNCKKSNQEIIQKLLSEKSWPVLHYGETEKIAILKLARQLNLDVKEIEILKS
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
RFIDLHLIVRGSWILPIRNYSLKTVANWMGFKWRQKNVSGSKALYWWIQYKNTLNDLFLK
HCCEEEEEEECCEEEEECCCCHHHHHHHHCCEEEECCCCCCCEEEEEEEEHHHHHHHHHH
KIIQYNRDDCMATLQIAKWLIKKRNY
HHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHKIWSPHLSIEIINRYKNFYKISNGDLYTGTKACKKGSRGVIGLKARSKLTNNINAEIQ
CCCCCCCCCHHHHHHHHHHHEEECCCCEECCHHHHCCCCCCEEEEHHHHHHHCCCCCCCC
PQLLKKVVGHSKWGDYKYIPVMYKLGHRTTKEHLFDLAFCSILLEPFQESKIEAGLVISN
HHHHHHHHCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
YSNQINIERIDLNQRLRKKVLSTFLNLNETLKRSIPDITEDRKKCTICSWQKFCDTEAKD
CCCEEEEEEECHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCCCCC
NGYLTDIDGIGSKTAFLLHKSGISNIKELATAREIDLGEKLNQFKDQKFEKASKFINQSK
CCCEEECCCCCCCEEEEEEHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
AYLSGTPIRIFESDNLSSLLSKKDSGFFMFDIESNPDEKHDFLYGFLKVNNLFENVKDDF
HHCCCCCEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
YDPILNLKKNCKKSNQEIIQKLLSEKSWPVLHYGETEKIAILKLARQLNLDVKEIEILKS
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
RFIDLHLIVRGSWILPIRNYSLKTVANWMGFKWRQKNVSGSKALYWWIQYKNTLNDLFLK
HCCEEEEEEECCEEEEECCCCHHHHHHHHCCEEEECCCCCCCEEEEEEEEHHHHHHHHHH
KIIQYNRDDCMATLQIAKWLIKKRNY
HHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA