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The map label for this gene is rfbU [H]

Identifier: 123968925

GI number: 123968925

Start: 1160134

End: 1161261

Strand: Reverse

Name: rfbU [H]

Synonym: A9601_13921

Alternate gene names: 123968925

Gene position: 1161261-1160134 (Counterclockwise)

Preceding gene: 123968926

Following gene: 123968924

Centisome position: 69.54

GC content: 23.49

Gene sequence:

>1128_bases
ATGAGATATGCTGAAGAACCTCATACTGGTCTAACTAGGTTTACTGTAAACATTTTTAAAAATTTAATCAAAAATTCATC
TAAAAACTATTTTTATTATTTATTACTTCCTCCTAAAGAATGCAGTAAACATTTTATTGATGACTTTCCCTCTGATTTAA
AAAACTTTAAAAAAATATTTTGGAGACAAAAAAGAGGATTAAAATGGAAAATACCATTTGTTTTATTTGATTTAGATATT
TTATTATTAGTTAAAGAAATTAAACCTAATTTATTCATATCTCCTTATATTGATCCTCCATTTATTCCATTTGTAAAAGT
TATCGCAACTATTCATGATTTAATATTTATTGAAGTAAAAGATTATTTTCAGCACTTATCTCTATTAAAAAGATTAGTTG
CATATTTTAGAATATTAATAACGATATTAATTTGTGATAATTTATTAGTGGTCTCATCTGCCACGAAAAAAAAATTAATT
AATAGATTTAATTGGATCCCAAATAGCTTTAAAAGTAAGATTAAAAATGCAAGTATTATTTCTAATGGAATAGACTTGTT
AAGTTTAGATAAAAAAAAATATGTTGAAATTAAAGAGTTAATTAACAAAGATTTCTTTCTCTATGTAGGAGATAGAAGAC
CCCATAAAAATATTATTTACTTAATTAAACTAGTCAAAGCTATTAATAAAAAATTTTCTAAAAATACTATTTTAATTTTA
GCTGGATCAAATAAGTATAAGAATTTAAAGCTTAATAAATTAATTACTAAAAATAATTCCTTAGTTCATGAGATTGTAAA
TCCTTCAGATTTAACATTAGATTTCCTTTACAGGAACTGTAAATCATTTTTCTTGATTTCAAAAGAAGAAGGATTTGGTA
TACCAGTCATTGAAGCTGCAAGTAGAGGCGCTAAGATTGTAATAAGTAATATTCCTGCTTTAAGAGAAATATCGCCCAAG
CATTCATGTATTATTAATTTACGAGAAATTACTGAAGATGTTAATAAGATTTCATGTTATTTGAAAAATGATCTAAGACC
AAATTCAAAAGAAGTTATCAAAAAATGGAGCTGGCAAAATTCCTCTAAAAATTTGTTTGAATTAATAAAAATTGTTTTAG
AATCTTAA

Upstream 100 bases:

>100_bases
TAAGAAGTTTCTTTCAAGTTTTAGGACAATTATCTTATCTATTAAATACAAAGATTTTTCTGAAAATATTTAAATGAAAA
AATATCGAGTAATAGTTGAT

Downstream 100 bases:

>100_bases
TAAGTTATTAAATACTATTATTATTAATATTAAAAATATTCTGAAAAGTGAGCTTAGATAATAAGGAAGATATTATTTTA
TTTGCAAATACACTATGGTT

Product: putative glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRYAEEPHTGLTRFTVNIFKNLIKNSSKNYFYYLLLPPKECSKHFIDDFPSDLKNFKKIFWRQKRGLKWKIPFVLFDLDI
LLLVKEIKPNLFISPYIDPPFIPFVKVIATIHDLIFIEVKDYFQHLSLLKRLVAYFRILITILICDNLLVVSSATKKKLI
NRFNWIPNSFKSKIKNASIISNGIDLLSLDKKKYVEIKELINKDFFLYVGDRRPHKNIIYLIKLVKAINKKFSKNTILIL
AGSNKYKNLKLNKLITKNNSLVHEIVNPSDLTLDFLYRNCKSFFLISKEEGFGIPVIEAASRGAKIVISNIPALREISPK
HSCIINLREITEDVNKISCYLKNDLRPNSKEVIKKWSWQNSSKNLFELIKIVLES

Sequences:

>Translated_375_residues
MRYAEEPHTGLTRFTVNIFKNLIKNSSKNYFYYLLLPPKECSKHFIDDFPSDLKNFKKIFWRQKRGLKWKIPFVLFDLDI
LLLVKEIKPNLFISPYIDPPFIPFVKVIATIHDLIFIEVKDYFQHLSLLKRLVAYFRILITILICDNLLVVSSATKKKLI
NRFNWIPNSFKSKIKNASIISNGIDLLSLDKKKYVEIKELINKDFFLYVGDRRPHKNIIYLIKLVKAINKKFSKNTILIL
AGSNKYKNLKLNKLITKNNSLVHEIVNPSDLTLDFLYRNCKSFFLISKEEGFGIPVIEAASRGAKIVISNIPALREISPK
HSCIINLREITEDVNKISCYLKNDLRPNSKEVIKKWSWQNSSKNLFELIKIVLES
>Mature_375_residues
MRYAEEPHTGLTRFTVNIFKNLIKNSSKNYFYYLLLPPKECSKHFIDDFPSDLKNFKKIFWRQKRGLKWKIPFVLFDLDI
LLLVKEIKPNLFISPYIDPPFIPFVKVIATIHDLIFIEVKDYFQHLSLLKRLVAYFRILITILICDNLLVVSSATKKKLI
NRFNWIPNSFKSKIKNASIISNGIDLLSLDKKKYVEIKELINKDFFLYVGDRRPHKNIIYLIKLVKAINKKFSKNTILIL
AGSNKYKNLKLNKLITKNNSLVHEIVNPSDLTLDFLYRNCKSFFLISKEEGFGIPVIEAASRGAKIVISNIPALREISPK
HSCIINLREITEDVNKISCYLKNDLRPNSKEVIKKWSWQNSSKNLFELIKIVLES

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43843; Mature: 43843

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAEEPHTGLTRFTVNIFKNLIKNSSKNYFYYLLLPPKECSKHFIDDFPSDLKNFKKIF
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHH
WRQKRGLKWKIPFVLFDLDILLLVKEIKPNLFISPYIDPPFIPFVKVIATIHDLIFIEVK
HHHHCCCEEECCHHEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
DYFQHLSLLKRLVAYFRILITILICDNLLVVSSATKKKLINRFNWIPNSFKSKIKNASII
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHCCCCHHHHHHHCCCHHH
SNGIDLLSLDKKKYVEIKELINKDFFLYVGDRRPHKNIIYLIKLVKAINKKFSKNTILIL
HCCCCEEECCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
AGSNKYKNLKLNKLITKNNSLVHEIVNPSDLTLDFLYRNCKSFFLISKEEGFGIPVIEAA
ECCCCCCCEEEHHEEECCCCHHHHHCCCCHHHHHHHHHCCHHEEEEECCCCCCCCHHHHC
SRGAKIVISNIPALREISPKHSCIINLREITEDVNKISCYLKNDLRPNSKEVIKKWSWQN
CCCCEEEEECCCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
SSKNLFELIKIVLES
CCHHHHHHHHHHHCC
>Mature Secondary Structure
MRYAEEPHTGLTRFTVNIFKNLIKNSSKNYFYYLLLPPKECSKHFIDDFPSDLKNFKKIF
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHH
WRQKRGLKWKIPFVLFDLDILLLVKEIKPNLFISPYIDPPFIPFVKVIATIHDLIFIEVK
HHHHCCCEEECCHHEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
DYFQHLSLLKRLVAYFRILITILICDNLLVVSSATKKKLINRFNWIPNSFKSKIKNASII
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHCCCCHHHHHHHCCCHHH
SNGIDLLSLDKKKYVEIKELINKDFFLYVGDRRPHKNIIYLIKLVKAINKKFSKNTILIL
HCCCCEEECCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
AGSNKYKNLKLNKLITKNNSLVHEIVNPSDLTLDFLYRNCKSFFLISKEEGFGIPVIEAA
ECCCCCCCEEEHHEEECCCCHHHHHCCCCHHHHHHHHHCCHHEEEEECCCCCCCCHHHHC
SRGAKIVISNIPALREISPKHSCIINLREITEDVNKISCYLKNDLRPNSKEVIKKWSWQN
CCCCEEEEECCCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
SSKNLFELIKIVLES
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]