Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968924
Identifier: 123968924
GI number: 123968924
Start: 1158929
End: 1159690
Strand: Reverse
Name: 123968924
Synonym: A9601_13911
Alternate gene names: NA
Gene position: 1159690-1158929 (Counterclockwise)
Preceding gene: 123968925
Following gene: 123968923
Centisome position: 69.45
GC content: 24.93
Gene sequence:
>762_bases GTGAAACGGATATATAAATTTATTTTTGAAAAAAAGTATAAAGCTATATTTGTACTTAATTATGTTGATTTTGCTTATTT ACTAGAAAACAAAATTGCTCCTATTAAAAAGCTCAATATTATTCCTGGTACTGGTGTAGATTCAACTAAATATAATCCTG ATAATTTAATTCAAAAAAGAGAAAAGTTAAATCTGTTTAATAAAGATAAAACATTAAAAATTGATGAAATGTTTATTACT TTTATTGGAAGAATTTCAGAGGATAAAGGGTTCTTTAGATTTATTTCTGCAGCTTTATTTTTACTTGACGATAAAAAATT TAAAGATTTAAAGTTTAGAATAGTTTCTCCAATTTCAGATATTGAGAAAATTGATATTGAATTAAAGACTTTTTTAATAA AAAATAATTTTGATATAAAGCCATATTTAAACGATCCAATTTCTTATTATGCACAATCTAAAGTTGTTGTTCTGCCAACT ATTTATGGTGAGGGTCTATCAAGAGTCGCATTAGAAGCAGGGTTCCTTGGTATTCCAATTGCGGCAGTTCACAATAGAGG TATATCATCTTTGTTTATTGACGGAGTTGCAGGAGAATTAACTATGGACTATGAACCATATGGAGTAAGTAGGATAATAA AAAAAATTTGTGAAAATTACTATCAATATCTTGATATTAATAAAAATATATTCAACAATTTAAGGCAAAAATACGATAAT TCTATTTCAACTAATACAGTATTTAAAATTTTAGATTCTTAA
Upstream 100 bases:
>100_bases TTTTTATCCTTTTAATAAAGTAGAAAAATATGCAACTTTGGAAGGTTTAGGAAGGGTCTTTTCTTCTAGAAAGATCTATA TGCGGATAGTGAAATTAATA
Downstream 100 bases:
>100_bases TGGTTATCCTAATAAGTCAAGACATAAAAATTAAATTAATTATTTTTTTATTAACAAACTAAACCTGTTATATAATGATT TAGATTTAATAAGCTTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKRIYKFIFEKKYKAIFVLNYVDFAYLLENKIAPIKKLNIIPGTGVDSTKYNPDNLIQKREKLNLFNKDKTLKIDEMFIT FIGRISEDKGFFRFISAALFLLDDKKFKDLKFRIVSPISDIEKIDIELKTFLIKNNFDIKPYLNDPISYYAQSKVVVLPT IYGEGLSRVALEAGFLGIPIAAVHNRGISSLFIDGVAGELTMDYEPYGVSRIIKKICENYYQYLDINKNIFNNLRQKYDN SISTNTVFKILDS
Sequences:
>Translated_253_residues MKRIYKFIFEKKYKAIFVLNYVDFAYLLENKIAPIKKLNIIPGTGVDSTKYNPDNLIQKREKLNLFNKDKTLKIDEMFIT FIGRISEDKGFFRFISAALFLLDDKKFKDLKFRIVSPISDIEKIDIELKTFLIKNNFDIKPYLNDPISYYAQSKVVVLPT IYGEGLSRVALEAGFLGIPIAAVHNRGISSLFIDGVAGELTMDYEPYGVSRIIKKICENYYQYLDINKNIFNNLRQKYDN SISTNTVFKILDS >Mature_253_residues MKRIYKFIFEKKYKAIFVLNYVDFAYLLENKIAPIKKLNIIPGTGVDSTKYNPDNLIQKREKLNLFNKDKTLKIDEMFIT FIGRISEDKGFFRFISAALFLLDDKKFKDLKFRIVSPISDIEKIDIELKTFLIKNNFDIKPYLNDPISYYAQSKVVVLPT IYGEGLSRVALEAGFLGIPIAAVHNRGISSLFIDGVAGELTMDYEPYGVSRIIKKICENYYQYLDINKNIFNNLRQKYDN SISTNTVFKILDS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29316; Mature: 29316
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIYKFIFEKKYKAIFVLNYVDFAYLLENKIAPIKKLNIIPGTGVDSTKYNPDNLIQKR CHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHHHHHHHH EKLNLFNKDKTLKIDEMFITFIGRISEDKGFFRFISAALFLLDDKKFKDLKFRIVSPISD HHCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH IEKIDIELKTFLIKNNFDIKPYLNDPISYYAQSKVVVLPTIYGEGLSRVALEAGFLGIPI HHHHHHEEEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEHHCCCHHHHHHHCCCCCCCH AAVHNRGISSLFIDGVAGELTMDYEPYGVSRIIKKICENYYQYLDINKNIFNNLRQKYDN HHHHCCCCHHEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC SISTNTVFKILDS CCCCCHHEEEECC >Mature Secondary Structure MKRIYKFIFEKKYKAIFVLNYVDFAYLLENKIAPIKKLNIIPGTGVDSTKYNPDNLIQKR CHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHHHHHHHH EKLNLFNKDKTLKIDEMFITFIGRISEDKGFFRFISAALFLLDDKKFKDLKFRIVSPISD HHCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH IEKIDIELKTFLIKNNFDIKPYLNDPISYYAQSKVVVLPTIYGEGLSRVALEAGFLGIPI HHHHHHEEEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEHHCCCHHHHHHHCCCCCCCH AAVHNRGISSLFIDGVAGELTMDYEPYGVSRIIKKICENYYQYLDINKNIFNNLRQKYDN HHHHCCCCHHEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC SISTNTVFKILDS CCCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA