The gene/protein map for NC_008816 is currently unavailable.
Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968888

Identifier: 123968888

GI number: 123968888

Start: 1128732

End: 1130030

Strand: Reverse

Name: 123968888

Synonym: A9601_13551

Alternate gene names: NA

Gene position: 1130030-1128732 (Counterclockwise)

Preceding gene: 123968889

Following gene: 123968885

Centisome position: 67.67

GC content: 39.88

Gene sequence:

>1299_bases
ATGAAACTCTTCCAACAAATGTTGGTTGCTGGTGCATCTTTGAGCTTATTAGCTCCAGTTGCTGCCCAAGCTTCCGATGT
TGTTAACATTGAAGAAATGAACAGCTATGTACGTAGCCAATCAAAATCTTCGAGACTTAACAGTAAAACATTCATTAACG
AAGTTAGTGCTGATATCGCTAACTTAAAGGGTCGTGTTGATGGCCTTGAAGTTAAACAAAAAGAATTTGAAGCCGGTGGC
TTCTCAGATACAACTGTAATGGATCAAAAAGTTGTATTTGATATTGGTGCAATAGATCTCAGTGAAACCGATGGCTCCGA
TGAGGCTGCTAAATTTGCCTACTCTTATAGAGCAAATCTTAATACAAGTTTTACTGGAGACGACAACCTCTATGTGAGAC
TCCTTTCTGGTAATCATGGCGGCTGGATGAAAAGTAACGTCGACGGAGGTTACTTGACCTCAGTTGGTAAAGGTGACAGC
TTAACTGTTGATAAGATTTGGTACTCCTTCCCAGTTGGGGAAAACAATACTGTATGGGTAGGTCCAAAGATTGAAAACTA
TTACATGCATGGTGCTGCCCCTTCAATTTATAAGCCTGTTACAAAACAATTCACACTTGGTGGAAACGGTAGCGCTTATG
GAGCAAGTACTGATACTGGTGCTGGTTGGGCTTTTAAAGCAGATAATGGATTTTCGATTAGTTCAAACGTAGGTACTAAA
TCACATTCAACCCAAAAAGTAGGTGGTAGTTACGTTGATAGTGGACTTCTCACTGACGAAACAAAAACAAGTTGGGCAAC
CCAGATTGGTTATACTCAGCCACAATACTCTGTTTCTGCAATTTTTAACTTAAAGTACAATGGTTGGACAGACGGTTATT
TACACACCACGACAGCTAAAGCTGCTATTTCTGGTGCAGACGGAAATCATACAGCTGTTGGTTTAAGAGGTTGGTGGAGA
CCAGATGGAACTGGAACCGCTACACCTTCAATTTCCGTAGGATACGATACGACTCAGTATTCAGGTGTTCCTTCTGGAAC
TTCAGATAGTACTGATATGTGGTTTGTCGGCCTCCAGTGGAAGGATATTTTCAATCCTGATGACAAAATTGGCTTAGCAA
TGGCACAGCCAACAAAGTTTGATGATGAAACTAATGATCCATTTGCTTATGAACTTTATTATTCATATAAAGTAAATGAT
GGCATGACTGTTACACCAACTATTTTTGGTGGAACTGATAGGGATGGTGGAACTGAAGATATTTTTGGAGCAGTTGTTCA
AACTACATTTAAATTCTAA

Upstream 100 bases:

>100_bases
AGTTACACGGGACTGAAACTTATATATCTTTCCTTTTCTGTTACGCTCGATACAGTATAGGTACCCAAAAAATTTTTGGG
CTACTTTAGTGTGAGGTAAA

Downstream 100 bases:

>100_bases
ATATAGTGAACAAATTAAAAAACACCCGAAAGGGTGTTTTTTTTTGCTTTTTTATATTTTAAAAACTTTTAGTTTTTTAC
CAACAATTCTCTCCTTCCCC

Product: porin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKLFQQMLVAGASLSLLAPVAAQASDVVNIEEMNSYVRSQSKSSRLNSKTFINEVSADIANLKGRVDGLEVKQKEFEAGG
FSDTTVMDQKVVFDIGAIDLSETDGSDEAAKFAYSYRANLNTSFTGDDNLYVRLLSGNHGGWMKSNVDGGYLTSVGKGDS
LTVDKIWYSFPVGENNTVWVGPKIENYYMHGAAPSIYKPVTKQFTLGGNGSAYGASTDTGAGWAFKADNGFSISSNVGTK
SHSTQKVGGSYVDSGLLTDETKTSWATQIGYTQPQYSVSAIFNLKYNGWTDGYLHTTTAKAAISGADGNHTAVGLRGWWR
PDGTGTATPSISVGYDTTQYSGVPSGTSDSTDMWFVGLQWKDIFNPDDKIGLAMAQPTKFDDETNDPFAYELYYSYKVND
GMTVTPTIFGGTDRDGGTEDIFGAVVQTTFKF

Sequences:

>Translated_432_residues
MKLFQQMLVAGASLSLLAPVAAQASDVVNIEEMNSYVRSQSKSSRLNSKTFINEVSADIANLKGRVDGLEVKQKEFEAGG
FSDTTVMDQKVVFDIGAIDLSETDGSDEAAKFAYSYRANLNTSFTGDDNLYVRLLSGNHGGWMKSNVDGGYLTSVGKGDS
LTVDKIWYSFPVGENNTVWVGPKIENYYMHGAAPSIYKPVTKQFTLGGNGSAYGASTDTGAGWAFKADNGFSISSNVGTK
SHSTQKVGGSYVDSGLLTDETKTSWATQIGYTQPQYSVSAIFNLKYNGWTDGYLHTTTAKAAISGADGNHTAVGLRGWWR
PDGTGTATPSISVGYDTTQYSGVPSGTSDSTDMWFVGLQWKDIFNPDDKIGLAMAQPTKFDDETNDPFAYELYYSYKVND
GMTVTPTIFGGTDRDGGTEDIFGAVVQTTFKF
>Mature_432_residues
MKLFQQMLVAGASLSLLAPVAAQASDVVNIEEMNSYVRSQSKSSRLNSKTFINEVSADIANLKGRVDGLEVKQKEFEAGG
FSDTTVMDQKVVFDIGAIDLSETDGSDEAAKFAYSYRANLNTSFTGDDNLYVRLLSGNHGGWMKSNVDGGYLTSVGKGDS
LTVDKIWYSFPVGENNTVWVGPKIENYYMHGAAPSIYKPVTKQFTLGGNGSAYGASTDTGAGWAFKADNGFSISSNVGTK
SHSTQKVGGSYVDSGLLTDETKTSWATQIGYTQPQYSVSAIFNLKYNGWTDGYLHTTTAKAAISGADGNHTAVGLRGWWR
PDGTGTATPSISVGYDTTQYSGVPSGTSDSTDMWFVGLQWKDIFNPDDKIGLAMAQPTKFDDETNDPFAYELYYSYKVND
GMTVTPTIFGGTDRDGGTEDIFGAVVQTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 46556; Mature: 46556

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQQMLVAGASLSLLAPVAAQASDVVNIEEMNSYVRSQSKSSRLNSKTFINEVSADIA
CHHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NLKGRVDGLEVKQKEFEAGGFSDTTVMDQKVVFDIGAIDLSETDGSDEAAKFAYSYRANL
HHCCCCCCCEEEHHHHCCCCCCCCEEECCEEEEEEEEEEECCCCCCCHHHHEEEEEECCC
NTSFTGDDNLYVRLLSGNHGGWMKSNVDGGYLTSVGKGDSLTVDKIWYSFPVGENNTVWV
CCEECCCCCEEEEEEECCCCCCEECCCCCCEEEECCCCCCEEEEHEEEEECCCCCCEEEE
GPKIENYYMHGAAPSIYKPVTKQFTLGGNGSAYGASTDTGAGWAFKADNGFSISSNVGTK
CCCCEEEEEECCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCC
SHSTQKVGGSYVDSGLLTDETKTSWATQIGYTQPQYSVSAIFNLKYNGWTDGYLHTTTAK
CCCCHHCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEHH
AAISGADGNHTAVGLRGWWRPDGTGTATPSISVGYDTTQYSGVPSGTSDSTDMWFVGLQW
EEEECCCCCEEEEEECEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEE
KDIFNPDDKIGLAMAQPTKFDDETNDPFAYELYYSYKVNDGMTVTPTIFGGTDRDGGTED
HCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHH
IFGAVVQTTFKF
HHHHHHHHHCCC
>Mature Secondary Structure
MKLFQQMLVAGASLSLLAPVAAQASDVVNIEEMNSYVRSQSKSSRLNSKTFINEVSADIA
CHHHHHHHHCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NLKGRVDGLEVKQKEFEAGGFSDTTVMDQKVVFDIGAIDLSETDGSDEAAKFAYSYRANL
HHCCCCCCCEEEHHHHCCCCCCCCEEECCEEEEEEEEEEECCCCCCCHHHHEEEEEECCC
NTSFTGDDNLYVRLLSGNHGGWMKSNVDGGYLTSVGKGDSLTVDKIWYSFPVGENNTVWV
CCEECCCCCEEEEEEECCCCCCEECCCCCCEEEECCCCCCEEEEHEEEEECCCCCCEEEE
GPKIENYYMHGAAPSIYKPVTKQFTLGGNGSAYGASTDTGAGWAFKADNGFSISSNVGTK
CCCCEEEEEECCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCC
SHSTQKVGGSYVDSGLLTDETKTSWATQIGYTQPQYSVSAIFNLKYNGWTDGYLHTTTAK
CCCCHHCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEHH
AAISGADGNHTAVGLRGWWRPDGTGTATPSISVGYDTTQYSGVPSGTSDSTDMWFVGLQW
EEEECCCCCEEEEEECEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEE
KDIFNPDDKIGLAMAQPTKFDDETNDPFAYELYYSYKVNDGMTVTPTIFGGTDRDGGTED
HCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHH
IFGAVVQTTFKF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]