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The map label for this gene is glyQ [H]

Identifier: 123968889

GI number: 123968889

Start: 1130176

End: 1130982

Strand: Reverse

Name: glyQ [H]

Synonym: A9601_13561

Alternate gene names: 123968889

Gene position: 1130982-1130176 (Counterclockwise)

Preceding gene: 123968890

Following gene: 123968888

Centisome position: 67.73

GC content: 36.43

Gene sequence:

>807_bases
ATGCAGCCATATGATACTGAAAAGGGTGCTGGGACAATGAATCCGCATACTTTTTTAAGGGCTATTGGACCAGAGCCTTG
GAGTGTAGCTTATGCGGAGCCATGTAGAAGACCTACAGATGGGCGTTTTGGTGATAATCCAAATAGGGCGCAACATTACT
TTCAATATCAAGTAATAATAAAACCTTCCCCGGAAGGAATACAGGAAAAATATTTGACGTCTCTAGAATCTCTTGGAATT
AATCCTAGAAATCATGACATAAGATTTGTGGAAGATAATTGGGAGTCTCCAACACTCGGAGCCTGGGGTGTAGGTTGGGA
AGTTTGGCTGGACGGAATGGAAGTTACCCAATTTACTTATTTCCAACAATGCGGAGGTATTGATTGTAATCCAATCCCAA
TTGAAATCACTTATGGACTAGAGAGGATTGCAATGTTTTTGCAGGATAAGGAAAGTATCTGGGACTTAAATTGGAACAAA
AATTTGAAATATAGCGATATTTGGCTTCAATTTGAAAAAAGTCAATGTTCTTATAATTTTACTGAATCTAGTGCTGAAAA
CCTCAGGAAATTATTTGAAATTTACCAAGATGAGGCAAATAATTTAATTGAAAAAAAATTAACTTATCCGGCCCTTGATT
ATGTTCTTAAATGTAGTCATACATTTAATTTGCTTGATGCAAGGGGTGTTATTTCAGTTACAGATCGTGCTCAATATATT
GAGAAGATCAGAAAACTAGCAAGAGAAGTTGCATCTTCATGGGTAGATGAAAGAGAATCCCTTAACTATCCATTGATAAA
GAACTAA

Upstream 100 bases:

>100_bases
CTGGCATTGATCTACATTTTCTACCATCCTAATCTAAATGTTTTTTCAGGAGATAATTCAAAATCTAAATAATTTTTGGT
CAGAAGAAGGTTGTTTGATT

Downstream 100 bases:

>100_bases
AACATAATATATATTTAGATAAGAAAAAGAATTTAAAGTATCAAAAGTTACACGGGACTGAAACTTATATATCTTTCCTT
TTCTGTTACGCTCGATACAG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPEGIQEKYLTSLESLGI
NPRNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCNPIPIEITYGLERIAMFLQDKESIWDLNWNK
NLKYSDIWLQFEKSQCSYNFTESSAENLRKLFEIYQDEANNLIEKKLTYPALDYVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWVDERESLNYPLIKN

Sequences:

>Translated_268_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPEGIQEKYLTSLESLGI
NPRNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCNPIPIEITYGLERIAMFLQDKESIWDLNWNK
NLKYSDIWLQFEKSQCSYNFTESSAENLRKLFEIYQDEANNLIEKKLTYPALDYVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWVDERESLNYPLIKN
>Mature_268_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPEGIQEKYLTSLESLGI
NPRNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCNPIPIEITYGLERIAMFLQDKESIWDLNWNK
NLKYSDIWLQFEKSQCSYNFTESSAENLRKLFEIYQDEANNLIEKKLTYPALDYVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWVDERESLNYPLIKN

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=271, Percent_Identity=56.0885608856088, Blast_Score=324, Evalue=5e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 31214; Mature: 31214

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVII
CCCCCCCCCCCCCCHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCHHHEEEEEEEEE
KPSPEGIQEKYLTSLESLGINPRNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTY
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHH
FQQCGGIDCNPIPIEITYGLERIAMFLQDKESIWDLNWNKNLKYSDIWLQFEKSQCSYNF
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHEEECCCCCCCEEEEEEEEEECCCCCCCC
TESSAENLRKLFEIYQDEANNLIEKKLTYPALDYVLKCSHTFNLLDARGVISVTDRAQYI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCEEEEHHHHHHH
EKIRKLAREVASSWVDERESLNYPLIKN
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVII
CCCCCCCCCCCCCCHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCHHHEEEEEEEEE
KPSPEGIQEKYLTSLESLGINPRNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTY
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHH
FQQCGGIDCNPIPIEITYGLERIAMFLQDKESIWDLNWNKNLKYSDIWLQFEKSQCSYNF
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHEEECCCCCCCEEEEEEEEEECCCCCCCC
TESSAENLRKLFEIYQDEANNLIEKKLTYPALDYVLKCSHTFNLLDARGVISVTDRAQYI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCEEEEHHHHHHH
EKIRKLAREVASSWVDERESLNYPLIKN
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA