Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968843
Identifier: 123968843
GI number: 123968843
Start: 1088308
End: 1088631
Strand: Reverse
Name: 123968843
Synonym: A9601_13101
Alternate gene names: NA
Gene position: 1088631-1088308 (Counterclockwise)
Preceding gene: 123968846
Following gene: 123968842
Centisome position: 65.19
GC content: 22.53
Gene sequence:
>324_bases TTGATTCTCCAAATTAAAGTTTTTCAAATTAGAAAATTGACAATGACAAATATATTATTAATTCTTTTTTTTGTAATTAT ATTATTATTTTTTTATTCAACACGAAACAATAAGTCAACCAAAAAAACAATAATTAGTCCAACTTATGTAACTTTCTTAA AAGAACAAGAATTTAATCCTGATATAAGTACTGATAATTGGGATTTACACAAACTTAGATTAGATAAATTTAAAAGATCA CAATATAAGGGATTAACTTTCTTCGTAAGTTCAGAAAATAAAATTTACTATCTTTCGGAAAATGGGGATAAGGTTTATTG CTAA
Upstream 100 bases:
>100_bases TTTATGATCTGATTTTGGTAAACCCTTGATAAGTATTCAAAAATACAAGAATATAAAAATAGGATTTTTTACTTACTAAG AAATTTATTCTGAAAAGTTC
Downstream 100 bases:
>100_bases CAGGTGAAATTAATTTTATAAATAAGAAAAGCAGATAGAAATTAATAATATTAATGAAGTATTTTTTTTTATTATCAGAA AAGTTTTATAAGTTTATCGA
Product: cytochrome b(C-terminal)/b6/petD
Products: NA
Alternate protein names: Cytochrome B/B6/PetD; Cytochrome B/B6/PetD-Like
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MILQIKVFQIRKLTMTNILLILFFVIILLFFYSTRNNKSTKKTIISPTYVTFLKEQEFNPDISTDNWDLHKLRLDKFKRS QYKGLTFFVSSENKIYYLSENGDKVYC
Sequences:
>Translated_107_residues MILQIKVFQIRKLTMTNILLILFFVIILLFFYSTRNNKSTKKTIISPTYVTFLKEQEFNPDISTDNWDLHKLRLDKFKRS QYKGLTFFVSSENKIYYLSENGDKVYC >Mature_107_residues MILQIKVFQIRKLTMTNILLILFFVIILLFFYSTRNNKSTKKTIISPTYVTFLKEQEFNPDISTDNWDLHKLRLDKFKRS QYKGLTFFVSSENKIYYLSENGDKVYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12850; Mature: 12850
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILQIKVFQIRKLTMTNILLILFFVIILLFFYSTRNNKSTKKTIISPTYVTFLKEQEFNP CEEEEEEHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHEEEEECCCCCC DISTDNWDLHKLRLDKFKRSQYKGLTFFVSSENKIYYLSENGDKVYC CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCEECC >Mature Secondary Structure MILQIKVFQIRKLTMTNILLILFFVIILLFFYSTRNNKSTKKTIISPTYVTFLKEQEFNP CEEEEEEHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHEEEEECCCCCC DISTDNWDLHKLRLDKFKRSQYKGLTFFVSSENKIYYLSENGDKVYC CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA