Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968830
Identifier: 123968830
GI number: 123968830
Start: 1083749
End: 1084171
Strand: Reverse
Name: 123968830
Synonym: A9601_12971
Alternate gene names: NA
Gene position: 1084171-1083749 (Counterclockwise)
Preceding gene: 123968831
Following gene: 123968827
Centisome position: 64.92
GC content: 35.7
Gene sequence:
>423_bases ATGCAAATAAAAACATTTATTCCATTTTGTTTCCTTTTTATTGGGACTTTAGCTTTACCACAACCTTCTCTTGCTGAAGA AAAAATTGAAGTTATACCTATTATTCAAAGTTCAAAAGGACTTAGTGGTAAAAATTTTAATTATCTCGAGGGTAAGCCTG AATTAAGACTCTTAAAAGTCAAGATTCCAGTTGGCTTGAAAACTCCAATTCATACTCATCCTTCCCCAATGTTGATTCAT GTCACCAGAGGAAGATTAAAACATGTTAGGGGTGAAGAAATTAATTTCTTTAAAGCGGGTGATGCATTTATAGAGAGTAA TAATGGGGGCCCCCACTATGTGAAAAATGTTGGGAAGAAGCCGGCCATACTTCATGTGGGAGTTGTATCAGTAGTTGGAA TGCCTACGGCCATAAATGAATAA
Upstream 100 bases:
>100_bases ATTTAAGAGAGGAAATTAAGCAATTAGAAAAGTTATATAAGAAATAAATTAGTTTATTATTTTTGCAAACTACCTATTAT TAGTGAAACTTAAATATCTA
Downstream 100 bases:
>100_bases AATTTTCTCTAAGTTATTCAATCTGCATTTTTAGGATTTACCTTTTACGAAGAACAACTGTAATGAGATACTCCTCCATA GTTAAAATACTGGCTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE
Sequences:
>Translated_140_residues MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE >Mature_140_residues MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15387; Mature: 15387
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC PAILHVGVVSVVGMPTAINE CCEEEEEHHHHHCCCCCCCC >Mature Secondary Structure MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC PAILHVGVVSVVGMPTAINE CCEEEEEHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA